Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq31 95.1 8e-15
>seq31
Length=345369
Score = 95.1 bits (104), Expect = 8e-15
Identities = 146/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605
||| || ||| || || || |||||||| |||| || ||||| |||| || | |||
Sbjct 218054 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCTTCGAGTTG 217995
Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665
||| || ||||| ||||| || ||||| || |||| | || || ||||| |||||
Sbjct 217994 TTTGCCAGCAAAGATCAAGCGTTGCTGGTCGGGCGGGATGCCCTCCTTGTCTTGGATTTT 217935
Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724
| || | ||| ||| | ||||||| || ||||| || | ||||| || || || |
Sbjct 217934 CGCCTTGA-CATTGTCGATGGTGTCGGAAGACTCCACCTCCAGGGTGATGGTCTTCCCAG 217876
Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750
| | || || || ||||||||||||
Sbjct 217875 TGAGGGTCTTGACGAAGATCTGCATA 217850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703443154880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |