Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29] 139 sequences; 33,567,624 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq31 120 7e-22 >seq31 Length=345369 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || || || |||||||| ||||| ||||||| || || ||| Sbjct 218082 CAAATCTTTGTCAAGACACTGACGGGAAAAACAATCACGCTGGAAGTTGAGTCGTCAGAC 218141 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||||||||| || ||||| ||| || ||| || Sbjct 218142 ACCATTGACAACGTCAAGTCGAAGATTCAAGACAAGGAAGGGATTCCCCCCGACCAGCAG 218201 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||||||||| ||||| |||||| | || || ||| | || |||||||| |||||| || Sbjct 218202 CGACTTATCTTTGCCGGCAAGCAGCTCGAGGACGGACGAACATTGGCCGACTACAACATC 218261 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || ||||| || Sbjct 218262 CAGAAGGAGTCCACCCTGCACCTGGT 218287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818695251019