Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq31 161 1e-34
seq1 132 5e-26
seq3 131 2e-25
seq25 107 2e-18
>seq31
Length=345369
Score = 161 bits (178), Expect = 1e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| || || || ||||||||||| || |||||||||||| | | |||| | || |||
Sbjct 217831 ACCAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCTTCG 217772
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|||||||| || ||||| ||||| |||||||| |||||||| ||||| || || ||||||
Sbjct 217771 AGCTGTTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCTTGA 217712
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
||||| ||||| ||| | ||||| || || ||||| ||||| || ||||| ||
Sbjct 217711 ATTTTCGACTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTT 217652
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | || || ||||| ||||||||
Sbjct 217651 CCGGTGAGGGTCTTTACGAAGATTTGCAT 217623
Score = 154 bits (170), Expect = 1e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || || ||||||||||| || |||||||||||| | | |||| |
Sbjct 218068 AGGCGCAGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 218009
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| ||||| |||||||| ||||| ||||| || ||||| |||||||| ||||| ||
Sbjct 218008 CCGTCTTCGAGTTGTTTGCCAGCAAAGATCAAGCGTTGCTGGTCGGGCGGGATGCCCTCC 217949
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| ||||| ||||| ||| | |||||||| || ||||| || || ||
Sbjct 217948 TTGTCTTGGATTTTCGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCCAGGGTG 217889
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | || || ||||| || |||||
Sbjct 217888 ATGGTCTTCCCAGTGAGGGTCTTGACGAAGATCTGCAT 217851
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| |||| ||| ||||| || ||||| ||||| || |||||||||||| |
Sbjct 218305 CCGCCGCGGAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 218246
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| |||||||| ||||| ||||| || | |||||||| ||||| ||
Sbjct 218245 AATGTTCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATAAGTCGCTGCTGGTCGGGGGGA 218186
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || ||||| ||| | ||||| ||||| || ||
Sbjct 218185 ATCCCTTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTGTCTGACGACTCAACT 218126
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || ||||| || || | || || || || ||||||||
Sbjct 218125 TCCAGCGTGATTGTTTTTCCCGTCAGTGTCTTGACAAAGATTTGCAT 218079
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| ||||| | ||| || ||||||||||||||||||||| | | |||
Sbjct 218524 AGGCGGAGCACCAGGTGCAACGTCGACTCCTTTTGAATGTTGTAGTCGGCTAGGGTTCTC 218465
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || ||||| || | ||||||||||| || || ||||| ||
Sbjct 218464 CCATCCTCAAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGATCAGGAGGAATGCCCTCC 218405
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||||||||| || || || | || || ||||| ||||| ||||| ||
Sbjct 218404 TTGTCTTGAATTTTCGACTTCACATTATCAATGGTATCAGACGACTCCACCTCGAGCGTG 218345
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| | || || |||||||| |||||
Sbjct 218344 ATGGTCTTCCCGGTCAGCGTCTTGACGAAAATCTGCAT 218307
>seq1
Length=1559860
Score = 132 bits (146), Expect = 5e-26
Identities = 669/1055 (63%), Gaps = 21/1055 (2%)
Strand=Plus/Minus
Query 7555 GAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGAC 7614
|||||| ||| |||||| | |||| || || || ||||| || || |||||||
Sbjct 379331 GAACGACCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAG 379272
Query 7615 GCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACC 7674
|| | ||||||| ||| | | ||||| ||| || || ||||| || || |||
Sbjct 379271 CGCGTCCTGGAAACCTACAACCTCATGTCCAGTAAATTCTTCACCCACGCCTCACCTACC 379212
Query 7675 ATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGC 7734
| || ||||||||| | ||| | |||||||| || | | ||||
Sbjct 379211 CTCTTCAACGCGGGCACGCCTCAGTGTCAGCTTTCCTCGTGCTTCCTCGTCGACATGAAG 379152
Query 7735 GAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATA 7793
|||||||||||||| ||||| ||| |||| || | || |||||||| ||||| |||
Sbjct 379151 GAAGACAGCATCGAGGGCATCTACGACACTCT-CAAGACTTGCGCCATGATTTCTAAAAT 379093
Query 7794 CGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTC 7853
| |||||| || || |||||||| || | | || || | ||| | ||| |
Sbjct 379092 GGCCGGCGGTATCGGCCTGAACGTCCACCGCATTCGTGCTACCGGATCCTACATTGCCGG 379033
Query 7854 CACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCG 7913
||||||||| | | | ||| | | |||||| |||| || ||||| ||| | | |
Sbjct 379032 CACCAACGGCACCTCGAACGGCGTCGTTCCCATGCTGCGAGTCTTCAACAACACTGCCAG 378973
Query 7914 ACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTG 7970
| | || ||||| || || ||||| |||||| |||||||| ||||||| ||
Sbjct 378972 ATACGTCGACCAAGGCGGCAACAAGCGACCGGGCGCCTTCGCCATCTACCTGGAGCCCTG 378913
Query 7971 GCACGCGGACATTTACGCAGTGCTAAATCTGCG-TCGCAACATGGGTTG--CGAAGACAG 8027
|||||| || | | | | | || |||| | | | || || | |||| | |
Sbjct 378912 GCACGCCGATGTCTTTGAATTCCTTGATCTCAGAAAGAACCACGGCAAGGAGGAAGTCCG 378853
Query 8028 CAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCA 8087
| || ||||| || ||| | | ||||| | ||||| || || |||| ||| || |
Sbjct 378852 C---GCTCGCGACCTCTTCCTTGCGCTGTGGATCCCCGACCTCTTCATGAAGCGTGTCGA 378796
Query 8088 TTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTA 8147
| | | ||| | |||||||||||| | |||||| | || ||
Sbjct 378795 GAAGAATGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGGCTCGCCGACTGCTA 378736
Query 8148 CGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCA 8207
||| | ||||| ||||| || | ||||| | ||| ||| ||| || |||
Sbjct 378735 CGGCGACGAGTTTGAGGCTTTGTATGAAAAGTACGAGCGCGAAGGC-CGT---GGCCGCA 378680
Query 8208 AGTGAAAGCGCGC----GACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTA 8263
|| || ||||| | ||| | | || |||| ||| | ||| || || |
Sbjct 378679 AGACAATCCGCGCCCAGAAGCTGTGGTACTCGATCCTCGAGGCTCAGACCGAGACTGGCA 378620
Query 8264 TGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCA 8323
|| | ||||||||||| || ||||||| || ||||| || | ||| |||| |
Sbjct 378619 ACCCCTTTATGCTGTACAAGGATCATTGCAACAGGAAGAGCAACCAGAAGAACTTGGGAA 378560
Query 8324 CCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGG 8383
||||| | || ||| || ||| | || ||| | ||||| || |||||||| || |
Sbjct 378559 CCATTCGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACTCGGCCCCCGACGAGGTTG 378500
Query 8384 CCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTCAA-ACACT 8442
|||| ||||| || || || | | ||| || || || | ||| ||| ||
Sbjct 378499 CCGTCTGCAACCTTGCCTCCCTTGCCCTGCCCGCCTTTGTGGA-CTACGACCAAGGCAAG 378441
Query 8443 TACGACTTTGAACAATTGAAAAACGCCGTGCAAGTGACGGTACGCAATTTAGATCGCATC 8502
|||||||| || | || | ||| | | ||| || || ||| | | |||
Sbjct 378440 TACGACTTCCAAAAGCTGCACGACGTCACCCGCGTGGTTGTCCGAAATCTCAACAAGATC 378381
Query 8503 ATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGCGTATCGAACATGCGCCACAGACCC 8562
|| || ||||| || ||| | ||||||| ||| |||||||| || | |||
Sbjct 378380 ATCGACGTCAACCACTACCCCGTCCAAGAAGCACGCAACAGCAACATGCGGCATCGTCCC 378321
Query 8563 GTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTT 8597
|||| || || || ||||| |||||||||| ||
Sbjct 378320 ATTGGTGTCGGTGTTCAAGGCTTGGCCGACGCCTT 378286
>seq3
Length=1259731
Score = 131 bits (144), Expect = 2e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| | ||| || ||| ||||| || |||||||||||| | | |||| |
Sbjct 602975 AGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 603034
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| ||||| ||||| || | |||||||| ||||| || ||||| ||
Sbjct 603035 CCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCC 603094
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | |||||||| || ||||| ||||| ||
Sbjct 603095 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 603154
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | || || |||||||| ||||| |||
Sbjct 603155 ATGGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 603196
>seq25
Length=408197
Score = 107 bits (118), Expect = 2e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| ||||||||||||||| | | ||| | || || ||||| ||||| ||||| |
Sbjct 312411 CCTTCTGAATGTTGTAGTCGGCCAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCAAAGA 312470
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||||||||||||| ||||| || ||||| || || || || || || ||||| ||
Sbjct 312471 TCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 312530
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | |||||||| || || || ||||| || ||||| || || || | || || || |
Sbjct 312531 CGATCGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACAA 312590
Query 134704 AA 134705
||
Sbjct 312591 AA 312592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397521870280
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