Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 239 6e-58
seq32 95.1 1e-14
>seq1
Length=1559860
Score = 239 bits (264), Expect = 6e-58
Identities = 1165/1841 (63%), Gaps = 27/1841 (1%)
Strand=Plus/Plus
Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857
|||| | ||||||| ||||| ||| ||| | | || | ||||||||| || |||
Sbjct 377563 TCAACGGTGAACTGGATGGGGGCCGCGGCGGCTTGCGTGCGCAAGTAGTACATGCCAGTC 377622
Query 117858 TTGAGCCCCTGCTTCCA---GGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGA 117914
||||| ||| ||||||| |||| | ||||| || | | |||| | ||||||
Sbjct 377623 TTGAGACCCAGCTTCCACCCGGCAAAG---TGCATCGACGTGATCTTGCCCATGGTTGGG 377679
Query 117915 CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCC 117974
| |||| | ||| | | ||||| || ||||| ||| || || || || |||
Sbjct 377680 TCCTTCATGTGAATGTTGAGAGACTGGGACTGGTCGATAAAGGCACCGCGGTCGGCGGCC 377739
Query 117975 ATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCA 118034
|| | | ||||| | | |||||||| || ||| |||| || ||| | ||
Sbjct 377740 ATCTGCACCACATGACGCTGCGAAATTTCCCAGACCGTCTTGTACAGAGCCTTTACCTCG 377799
Query 118035 TCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATA 118094
| || || | ||| || ||||| || || | | | ||| ||| ||||||
Sbjct 377800 CCGGGAATGTTGGGGATGTTCTGGATCGAGCCGTTCTCGGCAATGATGCGATTCTTCATG 377859
Query 118095 TCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAA 118152
| | |||||| ||||| || | |||||||| | || ||| | |||| ||
Sbjct 377860 GCGTCTGACCACAGACCCATGTCGACGAGATCCTTGAGAAGCCATGGGT--TGACGACCT 377917
Query 118153 CAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACT 118212
||||| ||||| ||| ||||| | | || || |||| |||||| ||||| |||||||
Sbjct 377918 GGAACTCGCCCGCCAGGACGCGTCGCTGGTAAATGTTGGACGTGTAGGGCTCGAAGCACT 377977
Query 118213 CATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGT 118272
| ||||| |||| || || | ||||| || ||||||||||| || | || || ||
Sbjct 377978 CGTTGTTGCCCAGAATCTGCGACGTGGACGCCGTGGGCATGGGCGCGAGCAGCAGCGAGT 378037
Query 118273 TACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTC---GTAGTTGAGCT 118329
| || | || | ||| | || | |||||||| | ||||| || ||| | |
Sbjct 378038 TGCGAATCCCGTGCTCCTTGATCTGCTCCTTGAGGGAATCCCACTCCCACAAGTCGGAC- 378096
Query 118330 TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 118389
| | | | | |||||| |||||||| ||||| |||| || || || ||||||| |
Sbjct 378097 --GGCGTCACGTTCCACATGTCAAACTGCAGGATGCCTTCAGAGGCCGGAGATCCCTTGA 378154
Query 118390 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 118449
| || || || ||||| ||| |||| || |||| | ||| ||||| |
Sbjct 378155 ACGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTCCACCGACGCCGTCAAGGCGGCGTGGT 378214
Query 118450 ACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTC 118509
| || || |||||||| | |||| | |||||| || ||||| | | |
Sbjct 378215 AGATGGTCTCAAAAATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTCAAAGGGCATGC 378274
Query 118510 GGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 118569
| | || || | || || | ||||| ||||||| ||||| || ||||| | ||
Sbjct 378275 GAAGCGCAAGGAAGGCGTCGGCCAAGCCTTGAACACCGACACCAATGGGACGATGCCGCA 378334
Query 118570 TATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 118629
| || || || || | ||||| || || ||||| | | | || ||||
Sbjct 378335 TGTTGCTGTTGCGTGCTTCTTGGACGGGGTAGTGGTTGACGTCGATGATCTTGTTGAGAT 378394
Query 118630 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT 118689
|| | || || |||| || || ||||||| | | || | ||| || |
Sbjct 378395 TTCGGACAACCACGCGGGTGACGTCGTGCAGCTTTTGGAAGTCGTACTTGCCTTGGTCGT 378454
Query 118690 CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 118749
| ||| | || ||||| | || || || || || || | ||| ||
Sbjct 378455 AGTCCACAAAGGCGGGCAGGGCAAGGGAGGCAAGGTTGCAGACGGCAACCTCGTCGGGGG 378514
Query 118750 CAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTT 118809
| | |||||| ||||| || ||||| | ||| || || |||||| ||||||||||| |
Sbjct 378515 CCGAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGTTCCCAAGTTCTTCT 378574
Query 118810 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 118869
| || ||| |||| || ||||||||| ||||| | || | || ||||| || |
Sbjct 378575 GGTTGCTCTTCCTGTTGCAATGATCCTTGTACAGCATAAAGGGGTTGCCAGTCTCGGTCT 378634
Query 118870 GGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCC 118928
| | || ||| || | | ||| | | || | || | | || | | | || ||
Sbjct 378635 GAGCCTCGAGGATCGAGTACCACAGCTTCTG-GGCGCGGATTGTCTTGCGGCCACGGCCT 378693
Query 118929 TCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCT 118988
|| |||||||||| || | || |||||||| || || | || | ||||||
Sbjct 378694 TCGCGCTCGTACTTTTCATACAAAGCCTCAAACTCGTCGCCGTAGCAGTCGGCGAGCCCA 378753
Query 118989 GGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAA 119047
|| || || | ||||| | ||| | ||| | ||| || ||| || |||||||||||
Sbjct 378754 GG-GCATTCGTTGGGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATGAA 378812
Query 119048 GAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 119107
|||||| |||||||| ||||| |||||| || ||| ||| |||| || | || ||
Sbjct 378813 GAGGTCGGGGATCCACAGCGCAAGGAAGAGGTCGCGAGCGCGGACTTCCTCCTTGCCGTG 378872
Query 119108 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 119167
|| | | || | || || | || ||| |||||||| || |||||||| | ||
Sbjct 378873 GTTCTTTCTGAGATCAAGGAATTCAAAGACATCGGCGTGCCAGGGCTCCAGGTAGATGGC 378932
Query 119168 GATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224
|| | ||| || || | |||| || || || |||||| ||| || ||
Sbjct 378933 GAAGGCGCCCGGTCGCTTGTTGCCGCCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGAC 378992
Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATT 119284
|| ||||| |||| || || | || ||| || || || ||| || |
Sbjct 378993 TCGCAGCATGGGAACGACGCCGTTCGAGGTGCCGTTGGTGCCGGCAATGTAGGATCCGGT 379052
Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344
|| | | ||||| || || || ||||| || ||| || || || |||||
Sbjct 379053 AGCACGAATGCGGTGGACGTTCAGGCCGATACCGCCGGCCATTTTAGAAATCATGGCGCA 379112
Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404
| ||||| || ||||||| || ||||| ||| |||| | ||| |||||||||
Sbjct 379113 AGTCTTGAGAGTGTCGTAGATGCCCTCGATGCTGTCTTCCTTCATGTCGACGAGGAAGCA 379172
Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464
|| | ||| | || || || ||||||||||| || |||| |||||| ||||
Sbjct 379173 CGAGGAAAGCTGACACTGAGGCGTGCCCGCGTTGAAGAGGGTAGGTGAGGCGTGGGTGAA 379232
Query 119465 CA--TACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGA 119522
| | || |||||| || |||||| |||| |||| ||||| || ||
Sbjct 379233 GAATTTACT--GGACATGAGGTTGTAGGTTTCCAGGACGCGCTCAATGTTGTCTCCCCAG 379290
Query 119523 ATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGC 119582
|| |||| | || ||||| | ||||| || ||| ||| | | | || || |||
Sbjct 379291 ATGCCGACAGCAACACGCATGATCATGTGCTGAGGTCGTTCGACAATCTTGCCGTCCAGC 379350
Query 119583 CTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
|| |||| || ||||| ||||||| |||||| ||
Sbjct 379351 TTCAGGAGATACGATCGCTCCAGCGTCTTGAAACCAAAGTA 379391
>seq32
Length=314566
Score = 95.1 bits (104), Expect = 1e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| | ||||||||||||||| |||||||| || |||||| || ||
Sbjct 225254 GCAAAGTCGGTGTGCAAACCCTCGTCACGGGATATGAGTTCGTTTGAGAAGGTAAGCCCG 225313
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
|||||||| || |||||||| | ||| || || | |||| ||| |||||||||
Sbjct 225314 GGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGACGCGAATGCACCACTGAAGAAGATG 225373
Query 130136 CCCTCCACACACGCGAACGCAA 130157
||||| ||| ||||| ||||
Sbjct 225374 CCCTCGACAGCGGCGAAGGCAA 225395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434125468840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |