Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq32 134 1e-26
>seq32
Length=314566
Score = 134 bits (148), Expect = 1e-26
Identities = 300/446 (67%), Gaps = 6/446 (1%)
Strand=Plus/Plus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|| |||||||| |||||||| || || || || || ||||| | | || |||||
Sbjct 224960 TTCTGGTATTCACCAACTCGCTTCTCAAAAAAGTTGGTCTTGCCACCCAGGGAGATATTC 225019
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
|||||||||||||||||||| | || ||||| |||||| | ||||| || | |
Sbjct 225020 TCCATAAAATCAAACGGATTCGCTGTCTTGTACACCTTTTCATTCCCGAGAGCAACCAAC 225079
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA-A 4435
| ||||| || || ||||| || || || |||| ||| | |||| || || | | |
Sbjct 225080 AGGCGGTCGGCAACGAATTCGATGTATTGCTTCATCAGTGTGGAGTTCATGCCGAGAAGA 225139
Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495
| ||| || || || | |||| || ||||| || || || ||||| || ||||| ||
Sbjct 225140 GCGCAC-GGCAGAGCCTCCGTCAGGAAATCTTGCTCAATGGTGACGGCATCGGTGATGAT 225198
Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAA--ACAATAAACACGCA 4553
|||| || | | || || | ||| || || | || | || |||
Sbjct 225199 TTCTTGGATGATTTGCTTGCTTG--CTCTTTGCTTGAGATGAGAGTGCAGCAGGCATGCA 225256
Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613
|| || |||||||| ||||| | | || |||||||| || || || | ||||||
Sbjct 225257 AAGTCGGTGTGCAAACCCTCGTCACGGGATATGAGTTCGTTTGAGAAGGTAAGCCCGGGC 225316
Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673
|| | || | ||| || |||||||| || | || |||| ||| ||||| |||||
Sbjct 225317 ATGAGGCCGCGCTTCTTGAGCCAAAAGATGGACGCGAATGCACCACTGAAGAAGATGCCC 225376
Query 4674 TCTACGGCGGCAAACGCTACTAATCG 4699
|| || ||||| || || || |||||
Sbjct 225377 TCGACAGCGGCGAAGGCAACCAATCG 225402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427048876551287
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |