Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 181 2e-40
seq15 84.2 5e-11
>seq1
Length=5395810
Score = 181 bits (200), Expect = 2e-40
Identities = 323/466 (69%), Gaps = 8/466 (2%)
Strand=Plus/Minus
Query 230176 GCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGC 230235
||| ||||||| || |||| | |||||| ||||| | || ||| |||| |
Sbjct 863711 GCCCAGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCC 863652
Query 230236 GCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTC 230295
||||||| |||||| ||| ||| ||||||||||||| | || |||||| |
Sbjct 863651 TCCATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCTGGCCTGACCTTCTCCAACGAGCTG 863592
Query 230296 ATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCA 230354
||| ||| ||||||||||| || || | | |||| | || ||| || | ||
Sbjct 863591 ATCTCTCGTGACGAGGGTCTGCA-CACCGACTTCGCCTGCCTGCTGTTCTCTCACCTGAG 863533
Query 230355 GAACAAGCTACCATTCGAGACG---GTCAAACAAATCATTACAGAAGCAGTTGAAAACGA 230411
|||| | ||| | || || ||| | | ||||| || || || || | | ||
Sbjct 863532 GAACCGCC--CCAG-CAAGGCGCGCGTCGAGAAGATCATCACTGATGCCGTCGCCATTGA 863476
Query 230412 AAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTAT 230471
||||||||| | ||| ||| |||| || | || | ||||||||||| | || ||
Sbjct 863475 GAAGGAGTTCCTGACTGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCAACCTGAT 863416
Query 230472 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGT 230531
| ||||||||||| ||||| |||||||| | | || || ||||| ||||||| ||
Sbjct 863415 GAAGCAGTACATCGAGTTCGTGGCCGACCGTCTCCTCGTCGCCCTTGGCAACGAGAAGGT 863356
Query 230532 GTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591
||||| || | |||||||| | || |||||| ||| || ||| || ||||||||
Sbjct 863355 CTACAAGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAA 863296
Query 230592 CTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||||| ||||||||| ||||||| |||| | | ||||| |||
Sbjct 863295 CTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGTCATG 863250
>seq15
Length=682953
Score = 84.2 bits (92), Expect = 5e-11
Identities = 121/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916
|||||| || || | ||| |||| ||||| ||||| ||||| || || || || ||
Sbjct 323053 GGGGAAACCCTCGACCTGCTCGTTGTTGATAGCACGCATGAGGGTGGACTTTCCGGCACC 322994
Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976
||| || || || ||||||||||| || || || ||| || || ||| |||| ||
Sbjct 322993 GTTGGGACCGCAAAGACCGTAGCGTCGACCACGCTTGAGGCGGAGACGGGTGCTGTTGAG 322934
Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTC 320027
||||| || |||| || || || || || ||||| || || || | |||
Sbjct 322933 GAGAATCTTGGCACCGTAGGCGAGGGAGAACTCACACTCGCAGAGGTTCTC 322883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057819215660390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |