Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 181 2e-40 seq15 84.2 5e-11 >seq1 Length=5395810 Score = 181 bits (200), Expect = 2e-40 Identities = 323/466 (69%), Gaps = 8/466 (2%) Strand=Plus/Minus Query 230176 GCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGC 230235 ||| ||||||| || |||| | |||||| ||||| | || ||| |||| | Sbjct 863711 GCCCAGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCC 863652 Query 230236 GCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTC 230295 ||||||| |||||| ||| ||| ||||||||||||| | || |||||| | Sbjct 863651 TCCATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCTGGCCTGACCTTCTCCAACGAGCTG 863592 Query 230296 ATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCA 230354 ||| ||| ||||||||||| || || | | |||| | || ||| || | || Sbjct 863591 ATCTCTCGTGACGAGGGTCTGCA-CACCGACTTCGCCTGCCTGCTGTTCTCTCACCTGAG 863533 Query 230355 GAACAAGCTACCATTCGAGACG---GTCAAACAAATCATTACAGAAGCAGTTGAAAACGA 230411 |||| | ||| | || || ||| | | ||||| || || || || | | || Sbjct 863532 GAACCGCC--CCAG-CAAGGCGCGCGTCGAGAAGATCATCACTGATGCCGTCGCCATTGA 863476 Query 230412 AAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTAT 230471 ||||||||| | ||| ||| |||| || | || | ||||||||||| | || || Sbjct 863475 GAAGGAGTTCCTGACTGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCAACCTGAT 863416 Query 230472 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGT 230531 | ||||||||||| ||||| |||||||| | | || || ||||| ||||||| || Sbjct 863415 GAAGCAGTACATCGAGTTCGTGGCCGACCGTCTCCTCGTCGCCCTTGGCAACGAGAAGGT 863356 Query 230532 GTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591 ||||| || | |||||||| | || |||||| ||| || ||| || |||||||| Sbjct 863355 CTACAAGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAA 863296 Query 230592 CTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||| ||||||||| ||||||| |||| | | ||||| ||| Sbjct 863295 CTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGTCATG 863250 >seq15 Length=682953 Score = 84.2 bits (92), Expect = 5e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916 |||||| || || | ||| |||| ||||| ||||| ||||| || || || || || Sbjct 323053 GGGGAAACCCTCGACCTGCTCGTTGTTGATAGCACGCATGAGGGTGGACTTTCCGGCACC 322994 Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976 ||| || || || ||||||||||| || || || ||| || || ||| |||| || Sbjct 322993 GTTGGGACCGCAAAGACCGTAGCGTCGACCACGCTTGAGGCGGAGACGGGTGCTGTTGAG 322934 Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTC 320027 ||||| || |||| || || || || || ||||| || || || | ||| Sbjct 322933 GAGAATCTTGGCACCGTAGGCGAGGGAGAACTCACACTCGCAGAGGTTCTC 322883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819215660390