Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=5395810 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || |||||||| ||| ||| | |||||||| ||||||||||| ||||| Sbjct 863885 ATGTATGTGTCGATGAGCAGGGAGTATGTCTCGGAGTGAATGTTCTCCATCATGATCTGG 863944 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | |||||||| || || ||| || || | || Sbjct 863945 AAGCCGTAGAAGCAACGGGCCTCAGGGATTTGAACCTCGGCGCTGAAACGCTCGACCAGG 864004 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| || || || ||| || ||||| || || | || ||||| || Sbjct 864005 TTCTCGTTGACAATACCATCGGAAGCAGCGAAGAAGGCAAGGATGGTAGAGATGAAGTAC 864064 Query 17414 TTTTCGTCCGGTGTAA---GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 |||||||| | | | || |||||| | | ||| ||||| | ||| | || Sbjct 864065 TTTTCGTCATCATTCAGGCGGTTGCTCCAGTCGTGCAGATCCTTGGAGAGATCAATCTCC 864124 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 |||| ||||| || |||| | ||| || ||||| | ||| || Sbjct 864125 TCGGCAGTCCAGAAGGAAGCCTCGTGCTTCTTGTACATTTGCCATAT 864171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543316330040