Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq3 185 1e-41 >seq3 Length=3828249 Score = 185 bits (204), Expect = 1e-41 Identities = 1180/1892 (62%), Gaps = 21/1892 (1%) Strand=Plus/Plus Query 52796 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 52855 |||| ||| | ||||| |||||||| || | || | | || || || |||||||| Sbjct 3340886 TCCTGGTCGACAGTGAACTGAATGGGCGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 3340945 Query 52856 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTC 52915 || ||||| ||||| || |||| ||| || ||||| || || | ||| | | Sbjct 3340946 CCAGTTTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGTG 3341005 Query 52916 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 52975 || || || ||||| || | ||| || || ||||||||||| || | ||| ||| Sbjct 3341006 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCACGGTCAGCA 3341065 Query 52976 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 53035 | ||| | | |||||| | || | | |||||| | || || || | ||| ||| Sbjct 3341066 GACATCTGCACAATCGTCCTCTGGGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 3341125 Query 53036 TCTTCTGGAAGGTTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTG 53092 || | || | | | | | ||||| ||||| ||| | || | ||||| | ||||| Sbjct 3341126 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATAATACGGTTCTTC 3341185 Query 53093 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152 || | ||| ||| | |||| || | | || || || || || || || Sbjct 3341186 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 3341245 Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212 || || || |||| | || | || ||| || ||| ||| || || || | || Sbjct 3341246 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 3341305 Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272 || || || |||| ||| || | || ||||| || ||||| ||||||| ||| || || Sbjct 3341306 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATCAACAAGCTG 3341365 Query 53273 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 53330 |||| | ||||| | || |||| || | || | || ||||| | ||| ||||| | Sbjct 3341366 TTTCGGATACCGT--GCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAGAGATCAG 3341423 Query 53331 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACAT 53390 | || || ||| || || | | || ||||| | | Sbjct 3341424 AAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGAGATCCCTCGT 3341483 Query 53391 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 53450 |||| | |||||| || || || || | || ||| ||| || ||| | | | Sbjct 3341484 ATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCATGGT 3341543 Query 53451 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT 53510 | ||||| |||||||||| || || || | | || || || ||||| || | Sbjct 3341544 AGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAAAGGC-ATG 3341602 Query 53511 TTAAGAGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 53569 |||| | || || || || | || || ||||||| ||| || || || |||| | Sbjct 3341603 CGGAGAGCCAAGAAGGCATCAGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGC 3341662 Query 53570 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGG 53629 | || | | | || || | || || | || | ||| || || || || | | Sbjct 3341663 ATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAAG 3341722 Query 53630 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----TTGTCCATC 53685 || | |||| || | | || || | || | | || | | |||| Sbjct 3341723 TTGCGAACAACGACCTGGGTGACCTCGTGGAGATGCTGGAAGTTGTAGCAGTTGTTTTCG 3341782 Query 53686 TATTACAAACATGTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCA 53743 || | | | ||| | || ||||| || ||||| || || || || ||||||| || | Sbjct 3341783 TAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGA 3341842 Query 53744 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 53803 | || | || ||||| ||||| || || | ||||||||| | || | Sbjct 3341843 GCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTC 3341902 Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 || || ||||| ||| || |||||||| || || ||||| || | || || || || Sbjct 3341903 TGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTC 3341962 Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTT 53923 |||| || | || || | ||| | ||||||| || | | | | Sbjct 3341963 TGGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCT 3342022 Query 53924 TCTCTTTCGTA--TAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAAT- 53980 ||||| ||||| | ||| | | | || |||||||| || | |||| ||| Sbjct 3342023 TCTCTCTCGTACTTCTCGTACAGAGCC--TCGAACTCGTCACCGTAG-CATTCAGCAAGG 3342079 Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 || || || || | || ||||| | | ||| || |||| | || || || ||||| Sbjct 3342080 CCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATG 3342139 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 ||||| ||||||||||| || || | || || || | || | ||||| || || Sbjct 3342140 AAGAGGTCAGGAATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCG 3342199 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 |||||| | |||||||||| | | | ||||| ||||| || |||| ||| || Sbjct 3342200 TGGTTCTTTCGCAAATCGAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATA 3342259 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | | ||||| || ||||| || ||||| || | ||| | || ||||| || | Sbjct 3342260 GCGAAAGCACCAGGACGCTTGTTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAG 3342319 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 || | | ||| ||||| |||||||| || | || ||||| |||| ||||| ||| Sbjct 3342320 ACACGAAGCATGGGAATGATACCATTTGACGTGCCGTTGGTACCGGCTATATAAGAGCCA 3342379 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 |||| || ||| | | ||||| || || || ||||| || ||||| | ||| Sbjct 3342380 GTGGCGCGGATACGATGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCG 3342439 Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400 ||| || | ||||| ||||| ||||| || || |||||| |||||| | || || Sbjct 3342440 CATGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGACGAGGAAG 3342499 Query 54401 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 54460 || |||| || | | || || || || || | ||||| || ||||| || Sbjct 3342500 CATGACGACAGCTGAGGCTGGGGTGTACCAGCGTTGAACAGCGTAGGCGATGCGTGTGTG 3342559 Query 54461 AACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGA 54520 || |||| | || | || ||||| ||||| || || || ||||| | Sbjct 3342560 AAAAATTTGTGCGACATCAGGTTGTAAGTCTCAATCACTCTCTCGATATCATCTCCCCAG 3342619 Query 54521 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 54580 || || || || |||||||| | ||||||||| || | ||| |||| ||| | | Sbjct 3342620 ATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGC 3342679 Query 54581 TTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 54640 || || | ||| || ||||| || || || || || || | ||| |||||||| Sbjct 3342680 TTGAGGAGGTATGACCGCTCCAAGGTCTTGAAGCCGAAGTATTGGTAGCCGAAGTCTCGG 3342739 Query 54641 TCGTAAATAATAACTGAGTTGAGTTTATCCTT 54672 || || | ||| | |||| ||| | ||||| Sbjct 3342740 TCATATACAATGGCCGAGTCGAGCTCTTCCTT 3342771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593718980203440