Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq3 185 1e-41
>seq3
Length=3828249
Score = 185 bits (204), Expect = 1e-41
Identities = 1180/1892 (62%), Gaps = 21/1892 (1%)
Strand=Plus/Plus
Query 52796 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 52855
|||| ||| | ||||| |||||||| || | || | | || || || ||||||||
Sbjct 3340886 TCCTGGTCGACAGTGAACTGAATGGGCGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 3340945
Query 52856 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTC 52915
|| ||||| ||||| || |||| ||| || ||||| || || | ||| | |
Sbjct 3340946 CCAGTTTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGTG 3341005
Query 52916 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 52975
|| || || ||||| || | ||| || || ||||||||||| || | ||| |||
Sbjct 3341006 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCACGGTCAGCA 3341065
Query 52976 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 53035
| ||| | | |||||| | || | | |||||| | || || || | ||| |||
Sbjct 3341066 GACATCTGCACAATCGTCCTCTGGGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 3341125
Query 53036 TCTTCTGGAAGGTTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTG 53092
|| | || | | | | | ||||| ||||| ||| | || | ||||| | |||||
Sbjct 3341126 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATAATACGGTTCTTC 3341185
Query 53093 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152
|| | ||| ||| | |||| || | | || || || || || || ||
Sbjct 3341186 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 3341245
Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212
|| || || |||| | || | || ||| || ||| ||| || || || | ||
Sbjct 3341246 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 3341305
Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272
|| || || |||| ||| || | || ||||| || ||||| ||||||| ||| || ||
Sbjct 3341306 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATCAACAAGCTG 3341365
Query 53273 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 53330
|||| | ||||| | || |||| || | || | || ||||| | ||| ||||| |
Sbjct 3341366 TTTCGGATACCGT--GCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAGAGATCAG 3341423
Query 53331 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACAT 53390
| || || ||| || || | | || ||||| | |
Sbjct 3341424 AAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGAGATCCCTCGT 3341483
Query 53391 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 53450
|||| | |||||| || || || || | || ||| ||| || ||| | | |
Sbjct 3341484 ATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCATGGT 3341543
Query 53451 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT 53510
| ||||| |||||||||| || || || | | || || || ||||| || |
Sbjct 3341544 AGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAAAGGC-ATG 3341602
Query 53511 TTAAGAGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 53569
|||| | || || || || | || || ||||||| ||| || || || |||| |
Sbjct 3341603 CGGAGAGCCAAGAAGGCATCAGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGC 3341662
Query 53570 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGG 53629
| || | | | || || | || || | || | ||| || || || || | |
Sbjct 3341663 ATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAAG 3341722
Query 53630 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----TTGTCCATC 53685
|| | |||| || | | || || | || | | || | | ||||
Sbjct 3341723 TTGCGAACAACGACCTGGGTGACCTCGTGGAGATGCTGGAAGTTGTAGCAGTTGTTTTCG 3341782
Query 53686 TATTACAAACATGTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCA 53743
|| | | | ||| | || ||||| || ||||| || || || || ||||||| || |
Sbjct 3341783 TAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGA 3341842
Query 53744 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 53803
| || | || ||||| ||||| || || | ||||||||| | || |
Sbjct 3341843 GCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTC 3341902
Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863
|| || ||||| ||| || |||||||| || || ||||| || | || || || ||
Sbjct 3341903 TGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTC 3341962
Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTT 53923
|||| || | || || | ||| | ||||||| || | | | |
Sbjct 3341963 TGGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCT 3342022
Query 53924 TCTCTTTCGTA--TAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAAT- 53980
||||| ||||| | ||| | | | || |||||||| || | |||| |||
Sbjct 3342023 TCTCTCTCGTACTTCTCGTACAGAGCC--TCGAACTCGTCACCGTAG-CATTCAGCAAGG 3342079
Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040
|| || || || | || ||||| | | ||| || |||| | || || || |||||
Sbjct 3342080 CCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATG 3342139
Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100
||||| ||||||||||| || || | || || || | || | ||||| || ||
Sbjct 3342140 AAGAGGTCAGGAATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCG 3342199
Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160
|||||| | |||||||||| | | | ||||| ||||| || |||| ||| ||
Sbjct 3342200 TGGTTCTTTCGCAAATCGAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATA 3342259
Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220
| | | | ||||| || ||||| || ||||| || | ||| | || ||||| || |
Sbjct 3342260 GCGAAAGCACCAGGACGCTTGTTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAG 3342319
Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280
|| | | ||| ||||| |||||||| || | || ||||| |||| ||||| |||
Sbjct 3342320 ACACGAAGCATGGGAATGATACCATTTGACGTGCCGTTGGTACCGGCTATATAAGAGCCA 3342379
Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340
|||| || ||| | | ||||| || || || ||||| || ||||| | |||
Sbjct 3342380 GTGGCGCGGATACGATGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCG 3342439
Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400
||| || | ||||| ||||| ||||| || || |||||| |||||| | || ||
Sbjct 3342440 CATGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGACGAGGAAG 3342499
Query 54401 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 54460
|| |||| || | | || || || || || | ||||| || ||||| ||
Sbjct 3342500 CATGACGACAGCTGAGGCTGGGGTGTACCAGCGTTGAACAGCGTAGGCGATGCGTGTGTG 3342559
Query 54461 AACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGA 54520
|| |||| | || | || ||||| ||||| || || || ||||| |
Sbjct 3342560 AAAAATTTGTGCGACATCAGGTTGTAAGTCTCAATCACTCTCTCGATATCATCTCCCCAG 3342619
Query 54521 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 54580
|| || || || |||||||| | ||||||||| || | ||| |||| ||| | |
Sbjct 3342620 ATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGC 3342679
Query 54581 TTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 54640
|| || | ||| || ||||| || || || || || || | ||| ||||||||
Sbjct 3342680 TTGAGGAGGTATGACCGCTCCAAGGTCTTGAAGCCGAAGTATTGGTAGCCGAAGTCTCGG 3342739
Query 54641 TCGTAAATAATAACTGAGTTGAGTTTATCCTT 54672
|| || | ||| | |||| ||| | |||||
Sbjct 3342740 TCATATACAATGGCCGAGTCGAGCTCTTCCTT 3342771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593718980203440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |