Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq5 113 4e-20 >seq5 Length=3440085 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||| |||||||| || ||||| ||||| | Sbjct 3138053 CCACCACGGAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3137994 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || ||| | || || | ||||||||| ||| Sbjct 3137993 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGG 3137934 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| ||| || || ||| Sbjct 3137933 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCGACC 3137874 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| | || ||||| || |||||||| Sbjct 3137873 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 3137827 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || ||||||| ||||| ||||| Sbjct 3137795 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 3137736 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | | ||||||||| || | || |||||||| ||||| || Sbjct 3137735 GCGAAGATCAAACGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTG 3137676 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| ||| ||| | |||| || | ||| ||||||||||| || | || Sbjct 3137675 ACGTTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTC 3137616 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 3137615 TTCACGAAGATCTGCAT 3137599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422257383361748