Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 241 1e-58 seq2 165 8e-36 seq5 145 8e-30 seq4 132 5e-26 >seq1 Length=5395810 Score = 241 bits (266), Expect = 1e-58 Identities = 331/456 (73%), Gaps = 5/456 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||| |||||| | | | ||| || ||| || | |||| | Sbjct 863761 AGAAGGCCGACTGGGCCCTGAAGTGGATCACGGACCACGAGTCCACCTACGCCCAGCGTC 863702 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| |||||||| || || ||||| ||||||| || ||||||| |||| || | Sbjct 863701 TGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTCT 863642 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| ||||| || ||||| |||||||| ||| ||||||||| ||||| | | Sbjct 863641 GGCTGAAGAAGCGCGGTCTGATGCCTGGCCTGACCTTCTCCAACGAGCTGATCTCTCGTG 863582 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||||||||| |||||| ||||| |||||||| || || | | || || | Sbjct 863581 ACGAGGGTCTGCACACCGACTTCGCCTGCCTGCTGTTCTCTCACCTGAGGAACCGCCCCA 863522 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || |||||||||| | ||||| |||| || || |||||||| ||| || ||||| | Sbjct 863521 GCAAGGCGCGCGTCGAGAAGATCATCACTGATGCCGTCGCCATTGAGAAGGAGTTCCTGA 863462 Query 117282 CCGAAGCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 | || || || || ||| ||||||| || | || || || | |||| ||| ||||| Sbjct 863461 CTGAGGCTCTTCCC-TGCAGTCTGCTCGGCATGAAC-GCCAACCTGATGAAGCAGTACAT 863404 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 ||||||||| |||||| | || || ||| || | | || ||| |||||| | | Sbjct 863403 CGAGTTCGTGGCCGACCGTCTCCTCGTCGCCCTTGGCAACGAGAAGGTCTACAAGTCCAC 863344 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCT-CCTTGG 117434 |||||| | ||||| ||| | ||||| |||||| Sbjct 863343 CAACCCCTTCGACTTCATGGAGAACATCTCCCTTGG 863308 Score = 150 bits (166), Expect = 2e-31 Identities = 207/286 (72%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| |||||| || |||||||| | ||||||| | || || Sbjct 864171 ATATGGCAAATGTACAAGAAGCACGAGGCTTCCTTCTGGACTGCCGAGGAGATTGATCTC 864112 Query 116696 TCCAAGGACACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | ||||||| | ||| |||| || |||| | |||||| Sbjct 864111 TCCAAGGATCTGCACGACTGGAGCAACCGCCTGAATGATGACGAAAAGTACTTCATCTCT 864052 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | | || ||||| ||||| || ||| || || ||||||||||| |||||||||||| Sbjct 864051 ACCATCCTTGCCTTCTTCGCTGCTTCCGATGGTATTGTCAACGAGAACCTGGTCGAGCGT 863992 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | |||| || | | ||||| || |||||||||||||| |||||| || Sbjct 863991 TTCAGCGCCG-AGGTTCAAATCCCTGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGAT 863933 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | || || ||||||||||| ||| Sbjct 863932 GGAGAACATTCACTCCGAGACATACTCCCTGCTCATCGACACATAC 863887 >seq2 Length=4895233 Score = 165 bits (182), Expect = 8e-36 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || ||||||||| | || || || || | Sbjct 4675369 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACCCTTGAGGTGGAGTCCTCG 4675428 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || |||| ||||| |||||||||||| | |||||| Sbjct 4675429 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 4675488 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| ||||||||| |||||||||| Sbjct 4675489 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 4675548 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||||||||| ||| || || || ||||||||| Sbjct 4675549 ATCCAGAAGGAGAGCACCCTTCACCTCGTGTTGCGC 4675584 >seq5 Length=3440085 Score = 145 bits (160), Expect = 8e-30 Identities = 156/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| |||||||| | || ||||| || || Sbjct 3137827 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 3137886 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| |||||||||||| | ||||| Sbjct 3137887 GACACTATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 3137945 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || ||||| || |||| ||||||||| ||||||||| Sbjct 3137946 GCAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 3138005 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 3138006 CATCCAGAAGGAGTCTACTCTCCA 3138029 Score = 141 bits (156), Expect = 1e-28 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| |||| || || | | Sbjct 3137599 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCT 3137658 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 3137659 GACACTATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCTGACCA 3137717 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| ||||| ||||| || |||| ||||||||| ||||||||| Sbjct 3137718 GCAGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAA 3137777 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || || || || Sbjct 3137778 CATCCAGAAGGAGTCCACCCTTCACCTCGT 3137807 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | ||||| || || || || | || || || || | Sbjct 3138055 ATGCAGATCTTCGTCAAGACATTGACGGGAAAGACGATAACACTGGAGGTGGAGTCCTCG 3138114 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || |||| ||||| ||||| ||||| | ||||| Sbjct 3138115 GACACCATCGACAACG-TGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCA 3138173 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||| |||| || | || || || |||||||| Sbjct 3138174 GCAGCGTCTCATCTTCGCTGGAAAGCAGTTGGAAGATGGCCGGACGCTGTCTGACTACAA 3138233 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || ||||| Sbjct 3138234 CATCCAGAAGGAGTCTACCCTGCA 3138257 >seq4 Length=3484069 Score = 132 bits (146), Expect = 5e-26 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| || |||||| | | Sbjct 949727 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 949786 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||||||| | |||||||| ||| | Sbjct 949787 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGATTG 949846 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || || | |||||||| ||||||||||||||||||| Sbjct 949847 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAG 949906 Query 40879 G 40879 | Sbjct 949907 G 949907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216926595280