Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq5 129 5e-25 >seq5 Length=3440085 Score = 129 bits (142), Expect = 5e-25 Identities = 251/360 (70%), Gaps = 18/360 (5%) Strand=Plus/Minus Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 |||||| ||||| | |||| | ||||||||| || || |||||| | | ||| |||| Sbjct 1320457 CACGTAGAACTG-CGCAAACATGTGACAAGGCGGCAGCGCCATCTTCTTCAAGTCGGCGG 1320399 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGTTAATTAGATCCAC 21226 |||||||||||| ||| | |||||| || |||| ||| || | | || | || Sbjct 1320398 GGTTCCACGCGCTCATGATGATGCGGCGGTCGTACGGGTTCGTCCGCAGCTTG--TGGAC 1320341 Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286 ||| | ||||||||| || ||||| || |||||| || | ||| | |||||| Sbjct 1320340 CACCTCGGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCGGTGCGGGCGTCGACGTACTC 1320281 Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC---CCTCGCGGCG 21343 || || || || | |||||||||||||||||| || ||||| |||| |||||||| | Sbjct 1320280 GGCGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCGGTG 1320221 Query 21344 GTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTA 21402 | ||| ||||| ||| | | | || |||| || |||| ||||||| || || | Sbjct 1320220 G---CCG-AGCCCCACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 1320165 Query 21403 CGCCGCGGCGCGACAGTTCGGTGGAGTCG--GTGGAGCCCCTGATAAACCACAGCAACTC 21460 |||| | |||||| || | | || || | ||| |||| ||||| |||| ||| Sbjct 1320164 CGCCCTGCTCCGACAG--CGAGAGCGACGACGTCGCGCCGCTGACGAACCAGAGCAGCTC 1320107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774159627440