Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3 197 2e-45
seq1 107 3e-18
>seq3
Length=3828249
Score = 197 bits (218), Expect = 2e-45
Identities = 629/968 (65%), Gaps = 12/968 (1%)
Strand=Plus/Plus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680
|| ||||| || || || || ||||||| || | | || | || || || |||||
Sbjct 3341810 GAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCGGTGCAC 3341869
Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740
||||| | |||||||| | || | || || ||||| ||| || ||||||
Sbjct 3341870 AGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCC 3341929
Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800
|| || || ||||| || | || || || |||| | || | || || | ||| | |
Sbjct 3341930 TTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACA-G 3341988
Query 79801 ACTC-GAGCCTTTATTATAGACTTGTATCTCTT---TTCTCTTTCGTA-TTGT-GTATAT 79854
|| ||||||| || | |||| | |||||| ||||| || | ||| |
Sbjct 3341989 CTTCTGAGCCTTCATGGT---CTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTACAG 3342045
Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914
| | ||||||||||| || | || | | || || || |||| || |||||
Sbjct 3342046 AGCC--TCGAACTCGTCACCGTAGCATTCAGCAAGGCCGGGGCACTCGTTGGGGCACATG 3342103
Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 79974
| | ||| || || | | || || || ||||| ||||| ||||||||||| || ||
Sbjct 3342104 AGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGGGCA 3342163
Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034
| || || || | || | |||||| || || |||||| | ||||||||||
Sbjct 3342164 AGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAATCGAGGAAC 3342223
Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094
| | | ||||| ||||| || |||| ||| || || | | | || || || |||||
Sbjct 3342224 TCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTGTTA 3342283
Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154
|| ||||| || | ||| | || ||||| || | || | | ||| ||||| ||||||
Sbjct 3342284 CCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCA 3342343
Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 80214
|| || || || ||||| |||| ||||| ||| |||| || ||| | |
Sbjct 3342344 TTTGACGTGCCGTTGGTACCGGCTATATAAGAGCCAGTGGCGCGGATACGATGGACGTTC 3342403
Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274
||||| || || || ||||| || ||||| | |||||| || | ||||| |||||
Sbjct 3342404 AGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCATGTCTTGAGAGTATCGTAGATA 3342463
Query 80275 CCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 80334
||||| ||||| ||||| |||||| | || || || |||| || | |
Sbjct 3342464 CCCTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCATGACGACAGCTGAGGCTGGGGT 3342523
Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394
|| || || || || | ||||| || ||||| || || |||| | |||| || |||
Sbjct 3342524 GTACCAGCGTTGAACAGCGTAGGCGATGCGTGTGTGAAAAATTTGTGCGACATCAGGTTG 3342583
Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454
|| |||||||| || || ||||| | || || || || |||||||| | |
Sbjct 3342584 TAAGTCTCAATCACTCTCTCGATATCATCTCCCCAGATACCAACAGCAACACGCATGATC 3342643
Query 80455 ATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAA 80514
|||||||| || | ||| |||| ||| || | || | | ||| || |||||
Sbjct 3342644 ATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGACCGCTCCAAG 3342703
Query 80515 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 80574
|| || || || || || | ||| |||||||| || || | ||| |||||| |||
Sbjct 3342704 GTCTTGAAGCCGAAGTATTGGTAGCCGAAGTCTCGGTCATATACAATGGCCGAGTCGAGC 3342763
Query 80575 TTATCCTT 80582
| |||||
Sbjct 3342764 TCTTCCTT 3342771
Score = 118 bits (130), Expect = 2e-21
Identities = 354/544 (65%), Gaps = 7/544 (1%)
Strand=Plus/Plus
Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765
|||| ||| | ||||| |||||||| || | || | | || || || ||||||||
Sbjct 3340886 TCCTGGTCGACAGTGAACTGAATGGGCGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 3340945
Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825
|| ||||| ||||| || |||| ||| ||| ||||| || || | ||| | |
Sbjct 3340946 CCAGTTTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGTG 3341005
Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885
|| || || ||||| || | ||| || || ||||||||||| || | ||| |||
Sbjct 3341006 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCACGGTCAGCA 3341065
Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945
| ||| | | |||||| | || | | |||||| | || || || | ||| |||
Sbjct 3341066 GACATCTGCACAATCGTCCTCTGGGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 3341125
Query 78946 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002
|| | || | | | | | ||||| || || ||| | || || ||||| | |||||
Sbjct 3341126 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATAATACGGTTCTTC 3341185
Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062
|| | ||| ||| | |||| || | | || || || || || || ||
Sbjct 3341186 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 3341245
Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122
|| || || |||| | || | || ||| || ||| ||| ||||| || | |
Sbjct 3341246 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 3341305
Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182
|| || || |||| ||| || | || ||||| || ||||| ||||||| ||| || ||
Sbjct 3341306 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATCAACAAGCTG 3341365
Query 79183 TTTCTAAGACCGTATGATC--TGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAG 79240
|||| | |||| || || |||| || | || | || ||||| ||||| |||||||
Sbjct 3341366 TTTCGGATACCG--TGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAGAGATCAG 3341423
Query 79241 ACGG 79244
| ||
Sbjct 3341424 AAGG 3341427
>seq1
Length=5395810
Score = 107 bits (118), Expect = 3e-18
Identities = 155/218 (71%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| || || ||||| ||| ||||||||||||||| | | || || ||||||||
Sbjct 863545 AACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 863604
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| || || || ||||| || || ||||| || ||||| || ||||| || || | ||
Sbjct 863605 AAGGTCAGGCCAGGCATCAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCG 863664
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127
|||||||| || || || || || |||||||| || | || | || ||| ||
Sbjct 863665 CTGAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAGACGCTGGGCGTAGGTGGACTCG 863724
Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165
||| |||||||| | ||||| |||||||||||
Sbjct 863725 TGGTCCGTGATCCACTTCAGGGCCCAGTCGGCCTTCTT 863762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718265630638920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |