Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=3440085 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| || || | ||||| || || || |||||||| ||| | |||| ||| || Sbjct 3138036 AACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTC 3137977 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 ||| || || || ||| ||||||| || ||||| || || || ||||| || ||||| Sbjct 3137976 GAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 3137917 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 || || || | | || | ||||| | || || || |||| ||| | ||||| Sbjct 3137916 GATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTT 3137857 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||||| | || || ||||| ||||||||| Sbjct 3137856 GCCGGTGAGGGTCTTGACGAAGATTTGCATA 3137826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507012162798960