Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 2e-17
seq2 91.5 3e-13
>seq5
Length=3440085
Score = 105 bits (116), Expect = 2e-17
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| || || |||||||| || || | || ||||| | || ||||||
Sbjct 3138251 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCATCTTCCAACTGCTTTCCA 3138192
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|| || || || | ||| || || || || || || || || ||||||||| ||||| ||
Sbjct 3138191 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATC-TTGCTCTT 3138133
Query 104482 TACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540
|| || || | ||| || | ||| || ||||| ||||| || ||||| || || | ||
Sbjct 3138132 CACGTTGTCGATGGTGTC-CGAGGACTCCACCTCCAGTGTTATCGTCTTTCCCGTCAATG 3138074
Query 104541 TTTTTACAAATATCTGCAT 104559
| || || || ||||||||
Sbjct 3138073 TCTTGACGAAGATCTGCAT 3138055
Score = 104 bits (114), Expect = 5e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || | ||||| || || || || |||
Sbjct 3137795 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 3137736
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | | ||| || |||||||| ||||| || || ||||||||||| | ||
Sbjct 3137735 GCGAAGATCAAACGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTG 3137676
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || || || || ||||| || || || ||||| ||||| || ||
Sbjct 3137675 ACGTTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTC 3137616
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 3137615 TTCACGAAGATCTGCAT 3137599
>seq2
Length=4895233
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || ||||| || || || | ||||| || || || || || || ||
Sbjct 4675559 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 4675500
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | ||| || || || || || || || || ||||||||||| | || |||||
Sbjct 4675499 ATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTG 4675440
Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| | ||| || | ||| || ||||| || || || ||||| || || || || || ||
Sbjct 4675439 TCGATGGTGTC-CGAGGACTCCACCTCAAGGGTGATGGTCTTCCCCGTGAGGGTCTTGAC 4675381
Query 104548 AAATATCTGCAT 104559
|| ||||||||
Sbjct 4675380 GAAGATCTGCAT 4675369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151393192440924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |