Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 4e-14 seq2 89.7 4e-13 >seq5 Length=3440085 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| ||| |||||| || |||||||| || | | || ||||||| |||||| Sbjct 3137801 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGC 3137742 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || | || ||||||||||| || || | | ||||||||| ||| || Sbjct 3137741 TTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTG 3137682 Query 48644 TGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 ||||| | | || || || || | ||||||| ||||| || ||||| || || | Sbjct 3137681 GACTTGACGTTGTCG--ATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAG 3137624 Query 48702 TGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733 |||| || ||||| || |||||||| ||| || Sbjct 3137623 TGAGGGTCTTCACGAAGATCTGCATGGTGACT 3137592 >seq2 Length=4895233 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574 ||||| | ||||| ||||||||||| || |||||||| || | | || ||||| Sbjct 4675580 AACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 4675521 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 || |||||||| ||| || | || | |||||||| || || | | ||||||||| Sbjct 4675520 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 4675461 Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 ||| || ||||| | | ||||| || | |||||| ||| | || ||||| Sbjct 4675460 TGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGTC 4675401 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||| || || || || |||||||| Sbjct 4675400 TTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 4675369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249387698353