Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 3e-15 >seq5 Length=3440085 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || | ||||| || | ||||| || ||||| || || || ||| Sbjct 3137753 TCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATTCCCTCCTTG 3137694 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || | ||||||| | ||| |||||||| || || || | |||||| Sbjct 3137693 TCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATG 3137634 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || || ||||| || || ||||| |||||||||||| Sbjct 3137633 GTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3137598 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||||| ||| || | || || | ||||||||||| ||||| ||||| || | ||| | Sbjct 3138289 TTTACTGTCCACCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGT 3138230 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || || | ||| |||| ||| ||||| | ||||| | | ||||| | Sbjct 3138229 AGTCAGACAGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGT 3138170 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| || ||||| || ||||| | ||| || ||| ||| | ||| ||||| | | Sbjct 3138169 CTGGTGGGATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCCGAGG 3138110 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | || || || ||||| || | || || || ||||||||||| Sbjct 3138109 ACTCCACCTCCAGTGTTATCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 3138055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289221915080