Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 4e-18
seq11 95.1 2e-15
>seq1
Length=5395810
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| |||||| || |||||||| || || |||||||| |||||
Sbjct 1772438 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCTAT 1772496
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| | ||||
Sbjct 1772497 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 1772537
>seq11
Length=1897611
Score = 95.1 bits (104), Expect = 2e-15
Identities = 83/101 (82%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 380254 GCCAAGCGTCACAGGAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 380196
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||||| || || ||||||||||| ||||||||| | ||||
Sbjct 380195 TCGTCGCCTCGCACGTCGTGGTGGTGTCAAGCGTATTTCTG 380155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074877249629
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |