Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3 329 8e-85 >seq3 Length=3828249 Score = 329 bits (364), Expect = 8e-85 Identities = 1125/1735 (65%), Gaps = 40/1735 (2%) Strand=Plus/Minus Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504 || ||||| || ||||| ||| | |||||||||||| |||||||| | ||| | Sbjct 3342663 GTCGAACGGCCACAGCACATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGATGATATC 3342604 Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTATT-CACGCACGCCACGC 363562 || | |||||| || || || || | || || | | || ||| ||||| ||| Sbjct 3342603 GAGAGAGTGATTGAGACTTACAACCTGAT--GTCGCACAAATTTTTCACACACGCATCGC 3342546 Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAA 363622 | || ||| ||| ||||| || | | || ||| |||| || ||||| || | | | Sbjct 3342545 CTACGCTGTTCAACGCTGGTACACCCCAGCCTCAGCTGTCGTCATGCTTCCTCGTCGACA 3342486 Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682 ||||||| || ||| |||||||||| || || || |||| || || | || |||| Sbjct 3342485 TGAAGGATGACAGCATTGAGGGTATCTACGATACTCTCAAGACATGCGCCATGATCTCCA 3342426 Query 363683 AGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 ||| || || || |||||| | | || |||| | | || || || | | ||| || Sbjct 3342425 AGATGGCCGGAGGTATTGGTCTGAACG-TCCATCGTATCCGCGCCACTGG-CTCTTATAT 3342368 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || || || ||||| | |||||||||||||||| || |||| || Sbjct 3342367 AGCCGGTACCAACGGCACGTCAAATGGTATCATTCCCATGCTTCGTGTCTTCAACAACAC 3342308 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 ||| | ||||| ||||||||||| ||||| || || || ||||| || || || Sbjct 3342307 TGCCCGTTACGTTGACCAGGGTGGTAACAAGCGTCCTGGTGCTTTCGCTATCTACCTGGA 3342248 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 ||| || || ||| | |||||||| || || | || || ||| || || ||||| Sbjct 3342247 GCCATGGCACGCTGATGTCTTTGAGTTCCTCGATTTGCGAAAGAACCACGGTAAGGAGGA 3342188 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | || || || || || ||| ||| || ||| || |||||| || |||||||| || Sbjct 3342187 GGTCCGGGCCCGCGACCTCTTCCTTGCCCTCTGGATTCCTGACCTCTTCATGAAGCGGGT 3342128 Query 363981 GGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 ||| | | | | | ||| | ||| | ||||| |||| || || || ||| | || Sbjct 3342127 TGAG--AAGAACGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTTGCTGAA 3342070 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA-ATCGGAGGGAAAGGCTCG 364097 | |||||||| | | ||||| ||||| ||||| || | | ||| ||| || Sbjct 3342069 TGCTACGGTGACGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCCGCGGC-CG 3342011 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 ||||| || || |||||||| |||| |||||| | || | |||| ||||| || Sbjct 3342010 CAAGACCATGAAGGCTCAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGG 3341951 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 | |||| ||| | ||||| ||| | |||||||||||| ||||||| || |||| || Sbjct 3341950 CAACCCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGG 3341891 Query 364218 TACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276 || | || |||| |||||| || |||||||| || || ||| ||||| || ||| Sbjct 3341890 AACCA-TCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGG 3341832 Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGA--T 364326 || || || ||||| || || || || || || || | ||| |||| | | Sbjct 3341831 TGGCTGTCTGCAACCTGGCCTCCATTGCTCTGCCAGCATATGTTGACTACGAAAACAACT 3341772 Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGAC 364386 | ||| || ||||||||| | || || ||| | | | | |||| | || Sbjct 3341771 GCTAC----AACTTCCAGCATCTCCACGAGGTCACCCAGGTCGTTGTTCGCAACTTGAAC 3341716 Query 364387 AAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC-----TAATATGC 364441 ||| | || || || | || || | ||||| | || | | || |||| Sbjct 3341715 AAGATCATTGATGTCAACCACTACCC----CGTGAAGGAG-GCATACAACAGCAACATGC 3341661 Query 364442 GTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGA 364501 | || | || |||||| ||||||| ||||| || ||||| | || || ||| | Sbjct 3341660 GACACAGGCCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCCTTCTTGGCTCTCCGCA 3341601 Query 364502 TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATT 364561 || | ||||| || ||||| ||||| || || || ||||||| || || || || Sbjct 3341600 TGCCTTTTGAGTCCCCTGAGGCTCGCCAGCTGAACAAACAGATCTTCGAGACCATCTACC 3341541 Query 364562 TTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATG 364621 ||| || ||||||| || || || | || || | || ||| || || | Sbjct 3341540 ATGCTGCTTTGACTGCGTCTTGCGACATCGCCAAGGTTGACGGCCCATACCAGACATACG 3341481 Query 364622 AGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTG 364681 |||| || || | ||||||||| | | || | ||| | ||| ||| ||| |||| Sbjct 3341480 AGGGATCTCCCGTCTCGCAGGGACAGCTTCAATATGACATGTGGGGCGTCCAGCCTTCTG 3341421 Query 364682 TCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCC 364741 | ||| |||||||| | | | || | ||| |||| |||| || ||| | Sbjct 3341420 ATCTCTGGGACTGGGATGCTTTGAAGGCAAAGATCAAGGAGCACGGTATCCGAAACAGCT 3341361 Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801 | | | || |||||||| || || || || | ||||| || || ||||||||||||| Sbjct 3341360 TGTTGATGGCACCCATGCCTACCGCATCCACATCGCAGATTCTGGGCAACAACGAGTGCT 3341301 Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861 |||| || | || || | || || || || ||| | || || || | ||| | Sbjct 3341300 TCGAGCCATACACCTCTAACATCTACCAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTCG 3341241 Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921 | || | ||| ||| ||| || | || || |||||| ||| ||||||| Sbjct 3341240 TCAACCCCTGGCTACTCAGGGACCTGACAGAGATTGGTCTGTGGTCTGAGGCTATGAAGA 3341181 Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981 || ||| || |||| |||||||| | |||||||| || | | || | ||| | | Sbjct 3341180 ACCGTATTATTGCCGAAGATGGTTCTATCCAGAACATCCCCAGCATCCCGGCCGATATCA 3341121 Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041 || || | ||||| ||||| |||||| | ||| | | || | | | ||| | || | Sbjct 3341120 AGGCTTTGTACAAGACCGTCTGGGAAGTCTCCCAGAGGACGATTGTGCAGATGTCTGCTG 3341061 Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101 | || ||||| || ||| ||| ||||| | ||| | |||| | |||| || Sbjct 3341060 ACCGTGGTGCCTTCATCGACCAGTCGCAGTCTCTCAACATCCACATGCGTGAGCCCACTA 3341001 Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| | || |||||| ||| ||| ||||| ||||| || || || Sbjct 3341000 TGGGCAAGATCACTAGCATGCACTTCACCGGCTGGAAGCTGGGTCTCAAAACTGG 3340946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303347705176046