Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq3 190 2e-43
seq5 136 4e-27
seq1 136 4e-27
seq2 111 1e-19
seq4 105 6e-18
>seq3
Length=3828249
Score = 190 bits (210), Expect = 2e-43
Identities = 924/1444 (64%), Gaps = 27/1444 (2%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||| || | |||||| ||| || | |||||| ||| | ||
Sbjct 3341237 TTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGC 3341296
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| |||||||| || || | || | |||||| |||||| |||| |
Sbjct 3341297 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATC 3341356
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
|| || || || | ||||||| |||||| | | |||| | | | |||| |||||
Sbjct 3341357 AACAAGCTGTTTCGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAG 3341416
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGG-CGGG-GC 145295
|| || ||| ||| |||||||||| || || || || || || | |||| |
Sbjct 3341417 AGATCAGAAGGCTGGACGCCCCACATGTCATATTG-AAGCTGTCCCTGCGAGACGGGAGA 3341475
Query 145296 TGCCTTGAAAGGAACTG-TAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGA 145354
| ||| | | | ||| || ||| | ||||||| |||||| ||| || |
Sbjct 3341476 TCCCTCGTATGT--CTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAA 3341533
Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414
|| | || || |||||| || || |||| ||| | || ||| | |||
Sbjct 3341534 GCAGCATGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCA 3341593
Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474
| |||||||| || | || ||||| || || ||||| | || || || ||||||
Sbjct 3341594 AAAGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCCTGGACACCAACACCAATGGGC 3341653
Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534
| ||| ||||||||| | ||| || | || || | || || || ||
Sbjct 3341654 CTGTGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATC 3341713
Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594
|| |||||||| || || || |||| || | | | | | | |||| | |
Sbjct 3341714 TTGTTCAAGTTGCGAACAACGACCTGGGTGACCTCGTGGAGATGCTGGAAGTTGTAGCAG 3341773
Query 145595 GCCTCGTCAACGACCACACA-GCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653
| || | | ||| | ||| | || || || |||| || || || |||
Sbjct 3341774 TTGTTTTCGTAGTCAACATATGCTGGC-AGAGCAATGGAGGCCAGGTTGCAGACAGCCAC 3341832
Query 145654 CTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCC 145713
||| || | | | ||| | | |||||||| ||||| ||| | |||||||||
Sbjct 3341833 CTCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCC 3341892
Query 145714 CAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCC 145773
||| || | ||| || || || | |||||| || ||||||||||||||| | || |||
Sbjct 3341893 CAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCC 3341952
Query 145774 AGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTGCTGC 145831
||||| ||| | ||| | ||| || || || | ||| || || ||
Sbjct 3341953 GGTCTCGGTCTGGGCCTCGAGGATGG--CGTACCACAGCTTCTGAGCCTTCATGGTCTTG 3342010
Query 145832 TGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAA 145891
|| |||||| ||| ||||| ||| ||| || |||| ||| || |||||||||
Sbjct 3342011 CGGCCGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAT 3342070
Query 145892 TCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACG 145951
|| | |||||||| |||| |||||| ||||| || | ||| ||||||| | ||
Sbjct 3342071 TCAGCAAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACC 3342130
Query 145952 CGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCC 146011
|||| ||| || | || || | ||| || || | | |||||| || | |||
Sbjct 3342131 CGCTTCATGAAGAGGTCAGGAATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCC 3342190
Query 146012 TCAGCACCCATGTTTCGCTT-CAAATTAAGCACACT-ATAGATGTCCGCGTGCCACGGTT 146069
|| ||| || ||| | ||||| || | ||| | ||| || |||||||| || |
Sbjct 3342191 TCCTTACCG-TGGTTCTTTCGCAAATCGAGGA-ACTCAAAGACATCAGCGTGCCATGGCT 3342248
Query 146070 CAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTGACGTACCA 146126
| | |||| |||| || || || ||| ||||||||||| |||| ||| |
Sbjct 3342249 CCAGGTAGATAGCGAAAGCACCAGGACGCTTGTTACCACCCTGGTCAACGTAACGGGCAG 3342308
Query 146127 TGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTTTA 146186
||||||| ||||| || | |||||| || || | | |||||| ||| | ||
Sbjct 3342309 TGTTGTTGAAGACACGAAGCATGGGAATGATACCATTTGACGTGCCGTTGGTACCGGCTA 3342368
Query 146187 TTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTACTTGG 146246
| | ||| || ||| | | ||| || |||| || | ||| ||| | |||||
Sbjct 3342369 TATAAGAGCCAGTGGCGCGGATACGATGGACGTTCAGACCAATACCTCCGGCCATCTTGG 3342428
Query 146247 ATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCGAA 146303
| || |||||| ||| ||| || |||||||| || |||||||| || |||| |
Sbjct 3342429 AGATCATGGCGCATGTC-TTGAGAGTATCGTAGATACCCTCAATGCTGTCATCCTTC--A 3342485
Query 146304 TGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCG 146363
|| ||| || ||||| || ||| ||| | | || || || || ||||| ||| |
Sbjct 3342486 TGTCGACGAGGAAGCATGACGACAGCTGAGGCTGGGGTGTACCAGCGTTGAACAGCGTAG 3342545
Query 146364 GGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCT-TGA 146422
| ||||| || || | ||| | ||||| || || || || | ||| |
Sbjct 3342546 GCGATGCGTGTGTGAAAAATTTGTGCGACATCAGGTTGTAAGTCTCAATCAC-TCTCTCG 3342604
Query 146423 ATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGCC 146482
|| || || || || || | ||| || ||||||| |||||| || ||||| || |
Sbjct 3342605 ATATCATCTCCCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACG 3342664
Query 146483 ACTT 146486
||||
Sbjct 3342665 ACTT 3342668
>seq5
Length=3440085
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| || || | || | ||| |||||||| || |||||||| |||
Sbjct 3137825 CCGCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3137766
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| |||| |||||||||||||| ||||||
Sbjct 3137765 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 3137706
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| || || ||||| | || | ||| || | ||||| |
Sbjct 3137705 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCCACC 3137646
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || || || || || || ||||| |||||||||
Sbjct 3137645 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3137598
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || || || | || |||||||| || |||||||| |||
Sbjct 3138053 CCACCACGGAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3137994
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| |||||||| || || |||| | ||||||||||| || |||
Sbjct 3137993 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGG 3137934
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||| |||| ||||||||
Sbjct 3137933 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCGACC 3137874
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| || || || ||||| || |||||
Sbjct 3137873 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 3137827
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | ||| |||||||| || |||||||| || |
Sbjct 3138281 CCACCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 3138222
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || | |||||| || ||| |||| | |||||||||||| || |||
Sbjct 3138221 AGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 3138162
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||| | | || | || || | |||||| |
Sbjct 3138161 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3138102
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || || || | || || ||||| ||||||||
Sbjct 3138101 TCCAGTGTTATCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 3138055
>seq1
Length=5395810
Score = 136 bits (150), Expect = 4e-27
Identities = 348/515 (68%), Gaps = 15/515 (3%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCG--CGA 46144
|| ||| | || ||||| |||||||||| |||||||||||| | | ||| | |
Sbjct 863774 CCCTGCATCCGTAAGAAGGCCGACTGGGCCCTGAAGTGGATCAC--GGACCACGAGTCCA 863717
Query 46145 CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTT 46204
| | |||| ||||| |||| ||||| || ||| ||||| |||| || || ||
Sbjct 863716 CCTACGCCCAGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTT 863657
Query 46205 TTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263
| ||| ||||||| | | || || | || | | ||||| |||||||| || ||||
Sbjct 863656 TCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTC-TGATGCCTGGCCTGACCTTCTCCAAC 863598
Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323
|||||||| || || |||||||| ||||| || ||||| || || || || | | ||
Sbjct 863597 GAGCTGATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCCTG--CCTGCTGT-TCTCT 863541
Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACAC-CGTGCTGAGCATGTTCAAGGAGGCGGTGGC 46382
| | || | || || || | | | ||| || || ||| || || || ||
Sbjct 863540 CACCTG-AGGAACCGCCCCAGCAAGGCGCGCGTCGAGAAGATCATCACTGATGCCGTCGC 863482
Query 46383 CATTGAGAAGGAGTTTTTTACGGCCGCACTGCCC-GCTGCCCTGCTGGGCATGAACGCAC 46441
||||||||||||||| | || | || || ||| || | ||||| |||||||||||
Sbjct 863481 CATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCCTGCAG-TCTGCTCGGCATGAACGCCA 863423
Query 46442 AGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGC 46501
| ||| | ||||||||||| || || ||||| || ||||| ||| | |
Sbjct 863422 ACCTGATGAAGCAGTACATCGAGTTCGTGGCCGACCGTCTCCTCGTCGCCCTTGGCAACG 863363
Query 46502 CGAAGCATTTTCACG-CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGC 46560
|||| | | || | | ||| || || || || ||| | ||||||||||| | |||
Sbjct 863362 AGAAG-GTCTACAAGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGC 863304
Query 46561 AAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| || || || ||||| ||||| ||||| || ||
Sbjct 863303 AAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 863269
>seq2
Length=4895233
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | |||| ||| | || | ||| |||||| || |||||||| |||
Sbjct 4675595 CCACCACGGAGGCGCAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 4675536
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || |||
Sbjct 4675535 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 4675476
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | || || | |||||| |
Sbjct 4675475 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACC 4675416
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | ||| | ||| || || || || || || ||||| ||||||||||
Sbjct 4675415 TCAAGGGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATGA 4675367
>seq4
Length=3484069
Score = 105 bits (116), Expect = 6e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| |||
Sbjct 949907 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 949848
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || ||||||||||| || ||||| || || ||||| ||| || ||||| | |
Sbjct 949847 TCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 949788
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || |||| |||||||| || | ||| | ||| || || || || || || ||||
Sbjct 949787 CGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 949728
Query 131225 A 131225
|
Sbjct 949727 A 949727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472010717243520
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