Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq5 91.5 1e-13
seq2 82.4 6e-11
>seq5
Length=3440085
Score = 91.5 bits (100), Expect = 1e-13
Identities = 165/238 (69%), Gaps = 5/238 (2%)
Strand=Plus/Minus
Query 16702 CATTTAC---CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTT 16758
||||||| || || || || | || |||| ||||| || |||||||| || |||||
Sbjct 3138291 CATTTACTGTCCACCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTT 3138232
Query 16759 GTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTG 16818
|||||| | || || | | || ||||| || || || || | || || ||||| ||
Sbjct 3138231 GTAGTCAGACAGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTG 3138172
Query 16819 GTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGC 16877
||| || | ||||| ||||| ||| ||||| |||||| | | | | |||||
Sbjct 3138171 GTCTGGTGGGATACCCTCCTTGTCCTGAATCTTGCT-CTTCACGTTGTCGATGGTGTCCG 3138113
Query 16878 CGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| |||| |||| || || || ||||| |||| || ||||| || ||||||||
Sbjct 3138112 AGGACTCCACCTCCAGTGTTATCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 3138055
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || |||||||| || ||||||||||||| | ||| | |||||
Sbjct 3138038 AGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 3137979
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || || || ||| | || || ||||| ||||| || | |||||| |||||
Sbjct 3137978 TCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 3137919
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | ||| || | | | | ||||||| || ||| || | ||||||||
Sbjct 3137918 TGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTC 3137859
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| || || ||||| || || |||||
Sbjct 3137858 TTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 3137827
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||||||||||| | ||| | ||||||| | ||
Sbjct 3137801 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGC 3137742
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || | ||||| ||||| ||| | ||||| ||||| ||| |
Sbjct 3137741 TTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTG 3137682
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | | |||||| | |||| || | ||||||||| || || ||
Sbjct 3137681 GACTTGACGTTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTG 3137622
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || ||||||||
Sbjct 3137621 AGGGTCTTCACGAAGATCTGCAT 3137599
>seq2
Length=4895233
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||| |||||| || ||||||||||||| | ||| | ||||||| | ||
Sbjct 4675571 TGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGC 4675512
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| ||||| || | |||||| ||||| ||| |
Sbjct 4675511 TTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTG 4675452
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | | ||||| || |||| || | ||||||||| || || ||
Sbjct 4675451 GACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGTCTTCCCCGTG 4675392
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || ||||||||
Sbjct 4675391 AGGGTCTTGACGAAGATCTGCAT 4675369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405086257235470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |