Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3 187 3e-42 seq1 86.0 8e-12 >seq3 Length=3828249 Score = 187 bits (206), Expect = 3e-42 Identities = 629/972 (65%), Gaps = 8/972 (1%) Strand=Plus/Plus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| || ||||| || || || || ||||||| || | | || | || ||||| Sbjct 3341804 GCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCG 3341863 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 ||||| || || | ||||||||| | || | || || ||||| ||| || Sbjct 3341864 GTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 3341923 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 |||||||| || || ||||| || | || || || |||| | || | || || | | Sbjct 3341924 GCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTAC 3341983 Query 62927 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTA--TAGTGTA 62983 || | | || ||||||| || | | | |||||| ||||| | ||| Sbjct 3341984 CACA-GCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTA 3342042 Query 62984 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA-GTCCAGGACATTCATCCGGACA 63042 | | | ||||||||||| || | |||| || | || || || || | || || Sbjct 3342043 CAGAGCC--TCGAACTCGTCACCGTAG-CATTCAGCAAGGCCGGGGCACTCGTTGGGGCA 3342099 Query 63043 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63102 ||| | | ||| || |||| | || || || ||||| ||||| ||||||||||| || Sbjct 3342100 CATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAG 3342159 Query 63103 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63162 || | || || || | || | ||||| || || |||||| | |||||| Sbjct 3342160 GGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAATCGAG 3342219 Query 63163 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63222 |||| | | | ||||| ||||| || |||| ||| || || | | | ||||| || || Sbjct 3342220 GAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTT 3342279 Query 63223 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63282 ||| || ||||| || | ||| | || ||||| || | || | | ||| ||||| || Sbjct 3342280 GTTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAT 3342339 Query 63283 ACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAAT 63342 |||||| || || || ||||| || | ||||| ||| |||| || ||| | | Sbjct 3342340 ACCATTTGACGTGCCGTTGGTACCGGCTATATAAGAGCCAGTGGCGCGGATACGATGGAC 3342399 Query 63343 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 63402 ||||| || || || ||||| || ||||| | |||||| || | ||||| || Sbjct 3342400 GTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCATGTCTTGAGAGTATCGTA 3342459 Query 63403 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63462 ||| ||||| || || |||||| |||||| | || || || |||| || | | Sbjct 3342460 GATACCCTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCATGACGACAGCTGAGGCTG 3342519 Query 63463 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAG 63522 || || || || || | ||||| || ||||| || || |||| | || | || Sbjct 3342520 GGGTGTACCAGCGTTGAACAGCGTAGGCGATGCGTGTGTGAAAAATTTGTGCGACATCAG 3342579 Query 63523 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63582 ||||| |||||||| || || ||||| | || || || || |||||||| Sbjct 3342580 GTTGTAAGTCTCAATCACTCTCTCGATATCATCTCCCCAGATACCAACAGCAACACGCAT 3342639 Query 63583 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63642 | ||||||||| || | ||| |||| ||| | | || | | ||| || || Sbjct 3342640 GATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGACCGCTC 3342699 Query 63643 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702 ||| || || || || || || | ||| |||||||| || || | ||| |||||| Sbjct 3342700 CAAGGTCTTGAAGCCGAAGTATTGGTAGCCGAAGTCTCGGTCATATACAATGGCCGAGTC 3342759 Query 63703 GAGTTTATCCTT 63714 ||| | ||||| Sbjct 3342760 GAGCTCTTCCTT 3342771 Score = 109 bits (120), Expect = 7e-19 Identities = 352/544 (65%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897 |||| ||| | ||||| |||||||| || | || | | || || || |||||||| Sbjct 3340886 TCCTGGTCGACAGTGAACTGAATGGGCGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 3340945 Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 61957 || ||||| ||||| || |||| ||| || ||||| || || | ||| | | Sbjct 3340946 CCAGTTTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGTG 3341005 Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017 || || || ||||| || | ||| || || ||||||||||| || | ||| ||| Sbjct 3341006 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCACGGTCAGCA 3341065 Query 62018 GCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62077 | ||| | | ||||||| | || | | |||||| | || || || | ||| ||| Sbjct 3341066 GACATCTGCACAATCGTCCTCTGGGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 3341125 Query 62078 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62134 || | || | | | | | ||||| || || ||| | || || ||||| | ||||| Sbjct 3341126 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATAATACGGTTCTTC 3341185 Query 62135 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62194 || | ||| ||| | |||| || | | || || || || || || || Sbjct 3341186 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 3341245 Query 62195 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 62254 || || || |||| | || | || ||| || ||| ||| || || || | || Sbjct 3341246 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 3341305 Query 62255 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62314 || || || |||| ||| || | || ||||| || ||||| ||||||| ||| || || Sbjct 3341306 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATCAACAAGCTG 3341365 Query 62315 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62372 |||| | |||| || || |||| || | || | || ||||| | ||| ||||| | Sbjct 3341366 TTTCGGATACCG--TGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAGAGATCAG 3341423 Query 62373 ACGG 62376 | || Sbjct 3341424 AAGG 3341427 >seq1 Length=5395810 Score = 86.0 bits (94), Expect = 8e-12 Identities = 150/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || || ||||| ||| ||| ||||||||||| | | || | |||||||| Sbjct 863545 AACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 863604 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || || || ||||| || || ||||| || ||||| || ||||| || || | || Sbjct 863605 AAGGTCAGGCCAGGCATCAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCG 863664 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CG 32828 ||||| || || || || || || ||||||| || | || | || || || Sbjct 863665 CTGAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAGACGCTGGGCGTAGGTGGACTCG 863724 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 ||| |||||||| | ||||| ||||||||||| Sbjct 863725 TGGTCCGTGATCCACTTCAGGGCCCAGTCGGCCTTCTT 863762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629204098800