Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 1e-13 >seq5 Length=3440085 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || ||||| || || || ||||| | || || || ||||||| |||| |||||||| Sbjct 3137596 ACCATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGTCT 3137655 Query 25056 TCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||||||||| | ||| | || | ||| ||||| || || || || ||||| Sbjct 3137656 TCTGACACTATCGACAACGTCAAGTCCAAGATTCA-GGACAAGGAGGGAATCCCTCCTGA 3137714 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || || || ||||| || | || || | ||||| | ||| || Sbjct 3137715 CCAGCAGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTA 3137774 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| || || || || ||||| || || Sbjct 3137775 CAACATCCAGAAGGAGTCCACCCTTCA 3137801 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | ||||| || ||||||| | || || ||||| || Sbjct 3137827 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 3137886 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||| || || || || || ||||| Sbjct 3137887 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 3137946 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || |||||||| || || | || || | ||||| | ||| ||||| Sbjct 3137947 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 3138006 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || || || || Sbjct 3138007 ATCCAGAAGGAGTCTACTCTCCACTTGGTTCT 3138038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326135741695