Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1 82.4 9e-11
>seq1
Length=5395810
Score = 82.4 bits (90), Expect = 9e-11
Identities = 193/288 (67%), Gaps = 5/288 (2%)
Strand=Plus/Plus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
|||||||| ||||| | ||| || || | || || || | |||||||| || |||
Sbjct 863885 ATGTATGTGTCGATGAGCAGGGAGTATGTCTCGGAGTGAATGTTCTCCATCATGATCTGG 863944
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
|| |||||||| || | || || | ||| || || || || | ||| || ||
Sbjct 863945 AAGCCGTAGAAGCAACGGGCCTCAGGGATTTGAACCTCGGCGCTGAAACGCTCGACCAGG 864004
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
|| || ||||| ||||||||||| || || || || || | || || || |
Sbjct 864005 TTCTCGTTGACAATACCATCGGAAGCAGCGAAGAAGGCAAGGATGGTAGAGATGAAGTAC 864064
Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598
|| || ||||| || | | || ||| ||| ||||| || || ||||| | ||
Sbjct 864065 TTTTCGTCATCATTCAGGCGGTTGCTCCAGTCGTGCAGATCCTTGGAGAGATCAATCTCC 864124
Query 93599 TCGACAGTCCAAAACGATGCTTC-TGCTTTTTTGTACATATCCCATAT 93645
||| ||||||| || || || || ||| || |||||||| | ||||||
Sbjct 864125 TCGGCAGTCCAGAAGGAAGCCTCGTGC-TTCTTGTACATTTGCCATAT 864171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556858342851720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |