Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 9e-11 >seq1 Length=5395810 Score = 82.4 bits (90), Expect = 9e-11 Identities = 193/288 (67%), Gaps = 5/288 (2%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 |||||||| ||||| | ||| || || | || || || | |||||||| || ||| Sbjct 863885 ATGTATGTGTCGATGAGCAGGGAGTATGTCTCGGAGTGAATGTTCTCCATCATGATCTGG 863944 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || |||||||| || | || || | ||| || || || || | ||| || || Sbjct 863945 AAGCCGTAGAAGCAACGGGCCTCAGGGATTTGAACCTCGGCGCTGAAACGCTCGACCAGG 864004 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || || ||||| ||||||||||| || || || || || | || || || | Sbjct 864005 TTCTCGTTGACAATACCATCGGAAGCAGCGAAGAAGGCAAGGATGGTAGAGATGAAGTAC 864064 Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 || || ||||| || | | || ||| ||| ||||| || || ||||| | || Sbjct 864065 TTTTCGTCATCATTCAGGCGGTTGCTCCAGTCGTGCAGATCCTTGGAGAGATCAATCTCC 864124 Query 93599 TCGACAGTCCAAAACGATGCTTC-TGCTTTTTTGTACATATCCCATAT 93645 ||| ||||||| || || || || ||| || |||||||| | |||||| Sbjct 864125 TCGGCAGTCCAGAAGGAAGCCTCGTGC-TTCTTGTACATTTGCCATAT 864171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858342851720