Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2 187 5e-42
seq5 172 1e-37
seq4 134 3e-26
seq15 105 1e-17
>seq2
Length=4895233
Score = 187 bits (206), Expect = 5e-42
Identities = 180/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || |||||||| || | ||| || ||| ||| || |||||||| || ||||||
Sbjct 4675595 CCACCACGGAGGCGCAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 4675536
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | || |||||||| ||
Sbjct 4675535 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 4675476
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | |||||| ||||||||||| | || || ||
Sbjct 4675475 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACC 4675416
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| | ||||||||| || |||||||||||||||||||| |||||||| |||
Sbjct 4675415 TCAAGGGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATGATG 4675365
Score = 125 bits (138), Expect = 1e-23
Identities = 372/563 (66%), Gaps = 27/563 (5%)
Strand=Plus/Minus
Query 59297 CCCGTGTGGACGTCCTCGCTGAAGCCAATCTCAGCAGTGCCGCCGAAAGGTACAAGCGCC 59356
|||||||| || |||||| ||| ||||| ||||| || || |||| |||| ||
Sbjct 3046903 CCCGTGTGCACATCCTCGGAGAACCCAATTTCAGCCGTACCACCGACCTCCTCAAGGGCA 3046844
Query 59357 TCTCGGCGGTAGACTGCGCATGTC--CCGACGCACACG---GCGCCGCCAAAGGTGTCGC 59411
| |||||||| | ||||| | || || || | | ||||| ||| ||| ||
Sbjct 3046843 GCCCGGCGGTACAA--CGCATTACTACCAACACAGATGCTAGCGCC-CCACCGGTCCCGG 3046787
Query 59412 GAGAAACCTGGATGAAACGGTAGAACAGTTCCTGGACGGATCCAGCAGCGCGCTCAACCC 59471
|| |||| | || |||||||||||| ||||| || || || | |||| ||||
Sbjct 3046786 TTGA--CCTGAACGACACGGTAGAACAGCTCCTGCGTGGCGCCGGCGCCCTGCTCGACCC 3046729
Query 59472 AAGTCTGGTCGGGGCGAACCTCGAAGAACTGGGGGGTCTGCACAATCGCGATCTTGCCGT 59531
| ||||| || | || ||||||||||||| ||||||| || ||||||||| |||
Sbjct 3046728 AGGTCTGCTCATCGGTGACGCGGAAGAACTGGGGGCTCTGCACGATGGCGATCTTGTCGT 3046669
Query 59532 CATGGGAAAAGTAGGGCATGATTTCCTTGAGGTAGTCAGGGCGCGGACAGAAGTCAGCAT 59591
| | | | | ||| | || |||| |||| ||||| || |||||||| || |
Sbjct 3046668 CGTCGAGCTGCTCGACCATCAGCTCGCGGAGGAAGTCCGGGCGGGGGCAGAAGTCGGCGT 3046609
Query 59592 CGAAGATGGCAAAGAAGGGGGCAGTTGTCTTGGTGAATGCGTTGCGAAGGTTGCCAGCCT 59651
|||||||||| |||||| | | || || | ||| || || |||||||| ||||
Sbjct 3046608 CGAAGATGGCGAAGAAGTCGCCCGTCGTGCGCGCGAACGCCCACCGCAGGTTGCCCGCCT 3046549
Query 59652 TTTTCA--TGTGGTTGTTTTCACGGGTA--ATGTAATTGAAGCCAAACCGCTGGGCGAGA 59707
| || | | || | | | || | | ||||| |||||||| |||||| || ||
Sbjct 3046548 TCTTGAGCCGCGGCCG-GTCCCCGCGCACCATGTAGTTGAAGCCGTACCGCTCCGCCAGC 3046490
Query 59708 TCCCGGATCTTGGGGTCTTT---CTTGTCATCGAGGACATAGAC---AGTCTTG---GTG 59758
||| | | ||| || | || ||||| || | || ||||| |
Sbjct 3046489 CGCCGCACC---ACGTCCTTGGCCCCATCGTCGAGCACGTGCACCTGGATCTTGTCCGCC 3046433
Query 59759 GGCCAGTCTAGAGCAGTGACGTAGGTCCAGGTGTTGTGAATAACCTCGAGGTCTTCGCCG 59818
|||||||| || || || |||| |||| ||||||| | | |||||| || ||| ||
Sbjct 3046432 GGCCAGTCCAGCGCCGTCACGTGCTTCCACGTGTTGTCCAGGATCTCGAGCTCCTCGGCG 3046373
Query 59819 CACACGGGAAGAAGGATGTCTAC 59841
||||| || || |||||| ||
Sbjct 3046372 CACACCGGCAGGTAGATGTCCAC 3046350
Score = 118 bits (130), Expect = 2e-21
Identities = 197/273 (72%), Gaps = 15/273 (5%)
Strand=Plus/Plus
Query 275303 GGTTTCAA-TATCTCGTGCGCGACAACCGGCCGCATATGAAGAAGGCCGGCAACCTCCGG 275361
|| ||||| || | ||||||| ||||||||| | |||||||| |||||||| |||
Sbjct 3046506 GGCTTCAACTACATGGTGCGCGGGGACCGGCCGCGGCTCAAGAAGGCGGGCAACCTGCGG 3046565
Query 275362 TCCGCCTTTACCAAGACAGACGG-CGAATTCTTTGTCATCTTTGACGCCGACTTCTGCCC 275420
| || || | || ||||| ||| ||||| | |||||| |||||||||||||||||
Sbjct 3046566 TGGGCGTTCGCGCGCAC-GACGGGCGACTTCTTCGCCATCTTCGACGCCGACTTCTGCCC 3046624
Query 275421 AAGGCCCGACTTCCTC---GAGGAGACACTTG-GCAGGATGAAGGCAGATCCCACGATTG 275476
| || ||||||||| ||| || | | |||| || | | || || ||| |
Sbjct 3046625 CCGCCCGGACTTCCTCCGCGAGCTGATGGTCGAGCAGCTCGACGAC-GA---CAAGATCG 3046680
Query 275477 CCATCTTCCAAACTCCCCAGTTCTT-CGAG-CAGCGCAATGAGCAGAACTACGTGGAGAA 275534
||||| | || | ||||||||||| || | || || ||||||||| || || ||| |
Sbjct 3046681 CCATCGTGCAGAGCCCCCAGTTCTTCCGCGTCACCG--ATGAGCAGACCTGGGTCGAGCA 3046738
Query 275535 GGGAGCCGGCGCCGTCCAGGAGCTCTTCTATCG 275567
||| ||||||||| |||||||| ||||| ||
Sbjct 3046739 GGGCGCCGGCGCCACGCAGGAGCTGTTCTACCG 3046771
>seq5
Length=3440085
Score = 172 bits (190), Expect = 1e-37
Identities = 179/235 (76%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
|||| | ||| || || || || | |||||||| || || ||||| || |||||||| |
Sbjct 3138289 TTTACTGTCCACCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGT 3138230
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
| || || || |||| |||||||| |||||||| || ||||| ||||| | || ||||
Sbjct 3138229 AGTCAGACAGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGT 3138170
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| ||||| || || |||||||| |||||||| ||| ||| ||||||||||| | |
Sbjct 3138169 CTGGTGGGATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCCGAGG 3138110
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || || |||| || || || |||||||| | ||||||||||| ||||||||
Sbjct 3138109 ACTCCACCTCCAGTGTTATCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 3138055
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||||||| || || ||||| || |||||||| || ||||||
Sbjct 3138053 CCACCACGGAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3137994
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| ||||| || || || | || ||||| || ||
Sbjct 3137993 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGG 3137934
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||| ||||| | || || ||
Sbjct 3137933 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCGACC 3137874
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || ||||||||||||||||| || |||||
Sbjct 3137873 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 3137827
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || |||||||| || |||||||| || ||||||
Sbjct 3137825 CCGCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3137766
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || | | || ||||| || ||
Sbjct 3137765 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 3137706
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| |||||||| | ||||||| ||||| ||||| | || || ||
Sbjct 3137705 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCCACC 3137646
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || ||||||||||| ||||| ||||||||
Sbjct 3137645 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3137599
>seq4
Length=3484069
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| || | |||||| |||||||| ||
Sbjct 949905 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 949846
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || || ||||| || || ||||| |||||||| || ||||| | |||||| |||
Sbjct 949845 AATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 949786
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | ||||||||| || ||||| |||||||| |||||
Sbjct 949785 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 949727
>seq15
Length=682953
Score = 105 bits (116), Expect = 1e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829
||||| | |||||| || ||| |||| ||| || || | | |||||| |||||
Sbjct 323100 GCGTCCAAGTCGTGCTCGACGAACACGGTCTTGACCTCATTTTGCTTGGGGAAACCCTCG 323041
Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889
| ||| | || || ||||| | ||||| ||| || || ||||||||||||
Sbjct 323040 ACCTGCTCGTTGTTGATAGCACGCATGAGGGTGGACTTTCCGGCACCGTTGGGACCGCAA 322981
Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCA 225949
|| ||||| | || ||||||| | ||| || ||| ||| ||||| |||||| ||
Sbjct 322980 AGACCGTAGCGTCGACCACGCTTGAGGCGGAGACGGGTGCTGTTGAGGAGAATCTTGGCA 322921
Query 225950 CCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTC 225987
|| ||||| ||||||||||| || ||||| |||| |||
Sbjct 322920 CCGTAGGCGAGGGAGAACTCACACTCGCAGAGGTTCTC 322883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921618333341160
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