Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 284 1e-71 seq1 109 7e-19 >seq3 Length=3828249 Score = 284 bits (314), Expect = 1e-71 Identities = 1168/1825 (64%), Gaps = 29/1825 (2%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||||||||| ||| |||| | |||||||||||||| || || ||||| | Sbjct 3340899 TGAACTGAATGGGCGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATGCCAGTTTTGAGAC 3340958 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 113683 || |||||||| | | ||||| | | |||| | || || || | |||| Sbjct 3340959 CCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGTGGG-CTCACGCATG 3341017 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||| | | || || || ||||||||| ||||| || || | ||| | | Sbjct 3341018 TGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCACGGTCAGCAGACATCTG---C 3341074 Query 113744 ACATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 ||| | || ||| | | |||||| || || |||| | ||| ||||| | ||| Sbjct 3341075 ACAATCGTCCTCTGGGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATATCGGCCGGG 3341134 Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 113860 || ||| || ||||| || ||| | | | || | | ||||||| ||| Sbjct 3341135 ATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATAATACGGTTCTTCATAGCCTCA 3341194 Query 113861 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCA 113920 ||||| |||||||||| | | || ||| | || ||||| || ||||| Sbjct 3341195 GACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACCTGGAACTCG 3341254 Query 113921 CCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 113980 || || || |||| | | ||||| || | ||||||||||| |||||||| ||||| Sbjct 3341255 CCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCACTCGTTGTTG 3341314 Query 113981 CCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 114040 |||| || || | ||||| || || |||||||||||||| | | |||||| |||| | Sbjct 3341315 CCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATCAACAAGCTGTTTCGGATA 3341374 Query 114041 CCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-GTCTCCCC 114099 || | ||| | || | |||| | || |||||||| || || | | || | Sbjct 3341375 CCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAGA-GATCAGAAGGCTGGAC 3341433 Query 114100 CTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTA 114159 |||||| ||| | || || || || ||| | || |||||||| |||||| ||| Sbjct 3341434 GCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGAGATCCCTCGTATGTCTGGTA 3341493 Query 114160 TGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTC 114219 |||||| ||||||| || | ||| | ||| | || || || || || ||||| Sbjct 3341494 TGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCATGGTAGATGGTCTC 3341553 Query 114220 AAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAA 114278 || || | |||| || | | |||| ||| ||||| | | ||| | Sbjct 3341554 GAAGATCTGTTTGTTCAGCTGGCGAG-CCTCAGGGGACTCAAAAGGCATGCGGAGAGCCA 3341612 Query 114279 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 114338 || |||| || ||||| |||||||| | ||||| || | |||| ||| || | Sbjct 3341613 AGAAGGCATCAGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGCATGTTGCTGT 3341672 Query 114339 TTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 114398 | || || |||||| || || ||| || | | | || | || | Sbjct 3341673 TGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGAACAA 3341732 Query 114399 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT 114458 | |||| |||| || || || | | | | | | | | | || | | |||| Sbjct 3341733 CGACCTGGGTGACCTCGTGGAGATGCTGGAAGTTGTAGCAGTTGTTTTCGTAGTCAACAT 3341792 Query 114459 ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACT 114518 | || || || || || ||||| || || |||| |||||| | || ||||| Sbjct 3341793 ATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACT 3341852 Query 114519 CTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT 114578 | || || || || |||| || || || ||||| |||| |||||| || || || Sbjct 3341853 CGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCT 3341912 Query 114579 TTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGA 114638 | ||| || ||||||||||| |||||| | || | || ||||| || |||| || || Sbjct 3341913 TGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGA 3341972 Query 114639 GAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTG-GCTCGCC-CCTCCTC-C 114694 | || || | ||| | | || | | || || ||| ||| | ||| ||| ||| | Sbjct 3341973 GGATGGCGTACCACAGCTTCTGAGCCTT---CA-TGGTCTTGCGGCCGCGGCCTTCTCTC 3342028 Query 114695 TCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCC 114754 |||||||| ||| || || || ||||| ||||| | || | || || || | Sbjct 3342029 TCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCATTCAGCAAGGCCGGGGCAC 3342088 Query 114755 TTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCT 114814 | | ||||| | ||| | ||| | || || |||||| ||||||||||||||||| Sbjct 3342089 TCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCA 3342148 Query 114815 GGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGA 114874 || |||||||| || |||||| || || || | || || | || || || Sbjct 3342149 GGAATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGTTCTTT 3342208 Query 114875 CGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGAC 114934 ||||| || | || || | || ||| |||||||| || |||||||| | |||| | Sbjct 3342209 CGCAAATCGAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCA 3342268 Query 114935 CCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGA 114988 || | |||| |||| |||||| || || | || ||| || || || ||| Sbjct 3342269 CC---AGGACGCTTGTTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGA 3342325 Query 114989 AGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCT 115048 ||||| ||||||||||||| || ||| || || || ||| ||| | |||| Sbjct 3342326 AGCATGGGAATGATACCATTTGACGTGCCGTTGGTACCGGCTATATAAGAGCCAGTGGCG 3342385 Query 115049 CTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCC 115108 | || | ||||| || || ||||||||| || ||| ||| ||||| ||||| | Sbjct 3342386 CGGATACGATGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCATGTC 3342445 Query 115109 GTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTC 115168 ||||| | ||||||| || || || |||| |||| | ||| |||||||| | Sbjct 3342446 TTGAGAGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCATGAC 3342505 Query 115169 GACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATA 115228 |||| || ||| ||||||||||||||||| || || || | ||||| |||| | Sbjct 3342506 GACAGCTGAGGCTGGGGTGTACCAGCGTTGAACAGCGTAGGCGATGCGTGTGTGAAAAAT 3342565 Query 115229 CCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCG 115288 || |||||| | ||| ||||| | || || || || || ||||| Sbjct 3342566 TTGTGCGACATCAGGTTGTAAGTCTCAATCACTCTCTCGATATCATCTCCCCAGATACCA 3342625 Query 115289 ATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGG 115348 | | || ||||| | ||||| || || ||| | | | ||||||||| | || Sbjct 3342626 ACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGG 3342685 Query 115349 AGGTAACTCTTCTCCAAGGTCTTGA 115373 ||||| | |||||||||||||| Sbjct 3342686 AGGTATGACCGCTCCAAGGTCTTGA 3342710 >seq1 Length=5395810 Score = 109 bits (120), Expect = 7e-19 Identities = 291/445 (65%), Gaps = 10/445 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 863268 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 863327 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 || || || ||||| | || || | | | |||| |||| |||| Sbjct 863328 GAAGTCGAAGGGGTTGGTGGACTTGTAGACCTTCTCGTTG-----CCAAGGGCGACGAGG 863382 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 ||||| || | ||| |||| ||||||| |||| | | |||||| |||| || Sbjct 863383 AGACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGA 863442 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 | || || || || || | |||| |||||||||| | ||||| || | ||| Sbjct 863443 CTGCAGGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGGCGACGGCATCAGTGATGATC 863502 Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052 | | | || | || | || | || ||| || ||| || Sbjct 863503 TTCTCGACGCGCGCCTTGCTGGGGCGGTTCCTCAGGTGAGAGAACAGCAGGCAGGCGAAG 863562 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 || ||| |||||||||||||| ||||| || || || |||||| ||| || ||||| Sbjct 863563 TCGGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATC 863622 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 ||||| |||||||||| |||||| || | || | ||| ||||||||| ||||| Sbjct 863623 AGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCTCA 863682 Query 126173 ACACACGCGAACGCAAAGAGACGCT 126197 ||| ||||| |||| ||||||| Sbjct 863683 ACAGCAGCGAAGGCAACCAGACGCT 863707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350964177240