Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3 226 3e-54 >seq3 Length=3828249 Score = 226 bits (250), Expect = 3e-54 Identities = 503/745 (68%), Gaps = 10/745 (1%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956 || || ||||||||||| || || || ||| ||| |||| || || ||||| | ||| Sbjct 3342546 CCTACGCTGTTCAACGCTGGTACACCCCAGCCTCAGCTGTCGTCATGCTTCCTCGTCGAC 3342487 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| ||| || || | ||| | |||||| || || | ||||| Sbjct 3342486 -ATGAAGGATGACAGCATTGAGGGTATCTACGATACTCTCAAGACATGCGCCATGATCTC 3342428 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || || || | | ||||| |||| || |||| || || || Sbjct 3342427 CAAGATGGCCGGAGGTATTGGTCTGAACGTCCAT--CGTATCCGCGCCACTGGCTCTTAT 3342370 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || ||||||||| ||||| || || || || | || ||||| || |||||||||||| Sbjct 3342369 ATAGCCGGTACCAACGGCACGTCAAATGGTATCATTCCCATGCTTCGTGTCTTCAACAAC 3342310 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || ||||| |||||||||||| | | | ||| ||||||| |||| || Sbjct 3342309 ACTGCCCGTTACGTTGACCAGGGTGGTAACAAGCGTCCTGGTGCTTTCGCTATCTACCTG 3342250 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| || || | ||| |||| |||||||||||||||| || || Sbjct 3342249 GAGCCATGGCACGCTGATGTCTTTGAGTTCCTCGATTTGCGAAAGAACCACGGTAAGGAG 3342190 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || ||||| | ||||||||| || |||||| | || ||||| || ||||| || Sbjct 3342189 GAGGTCCGGGCCCGCGACCTCTTCCTTGCCCTCTGGATTCCTGACCTCTTCATGAAGCGG 3342130 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || ||||| ||| || ||||| || | || ||||| || || ||||| || | || Sbjct 3342129 GTTGAGAAGAACGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTTGCTGAA 3342070 Query 94375 GTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCA 94432 | || | || || || || |||| | ||||| | | ||| | |||| Sbjct 3342069 TGCTACGG-TGACGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCCGCGGCC- 3342012 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | ||| ||| | ||| |||||||||| | ||| | || | ||| ||||| | Sbjct 3342011 GCAAGACCATGAAGGCTCAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCG 3341952 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | | |||| ||| | | |||||| | |||| |||| ||||||| || |||| | Sbjct 3341951 GCAACCCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGG 3341892 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||| ||||| || |||||||||||||| ||||||| | |||| || ||| Sbjct 3341891 GAACCATCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGG 3341832 Query 94613 TTGCTGTGTGTAACCTGGGCTCCAT 94637 | ||||| || ||||||| |||||| Sbjct 3341831 TGGCTGTCTGCAACCTGGCCTCCAT 3341807 Score = 113 bits (124), Expect = 4e-20 Identities = 242/359 (67%), Gaps = 2/359 (1%) Strand=Plus/Minus Query 95003 TTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCG 95062 |||| | ||| | ||||| || |||| || | ||| | |||||||| ||| | | Sbjct 3341453 TTCAATATGACATGTGGGGCGTCCAGCCTTCTGATCTCTGGGACTGGGATGCTTTGAAGG 3341394 Query 95063 CTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTG-TGGCCCCCATGCCCACGGCC 95121 | | | | | |||||| | |||| ||| ||| |||| |||||||| || || Sbjct 3341393 CAAAGATCAAGGAGCACGGTATCCGAAACA-GCTTGTTGATGGCACCCATGCCTACCGCA 3341335 Query 95122 TCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTAC 95181 ||||| ||||||| || ||||||||||||| ||||| || | |||||| ||| | ||| Sbjct 3341334 TCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCTCTAACATCTAC 3341275 Query 95182 AACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTG 95241 | | || ||||| || || || |||| ||| ||||| || || |||||||| Sbjct 3341274 CAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTACTCAGGGACCTG 3341215 Query 95242 ACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCC 95301 || | ||| ||||| ||| | ||||||| | | || | || || Sbjct 3341214 ACAGAGATTGGTCTGTGGTCTGAGGCTATGAAGAACCGTATTATTGCCGAAGATGGTTCT 3341155 Query 95302 GTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGA 95360 ||||||||||||| || |||| || |||||||| | ||||||||||| ||||| Sbjct 3341154 ATCCAGAACATCCCCAGCATCCCGGCCGATATCAAGGCTTTGTACAAGACCGTCTGGGA 3341096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721017033880