Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq5 111 1e-19 seq3 105 6e-18 seq4 102 8e-17 seq2 96.9 3e-15 >seq5 Length=3440085 Score = 111 bits (122), Expect = 1e-19 Identities = 146/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| || || ||||| || ||| Sbjct 3137795 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 3137736 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| || ||||| || |||||||||||| || || |||| Sbjct 3137735 GCGAAGATCAAACGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTG 3137676 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | | ||| || |||| ||| | || ||||| || || || Sbjct 3137675 ACGTTG-TCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGGGT 3137617 Query 127096 TTTTACAAAAATCTGCATGG 127115 || || || |||||||||| Sbjct 3137616 CTTCACGAAGATCTGCATGG 3137597 Score = 107 bits (118), Expect = 2e-18 Identities = 167/235 (71%), Gaps = 3/235 (1%) Strand=Plus/Minus Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939 ||||| |||||| || | || | |||||| || | |||||||| || || || ||||| Sbjct 3138287 TACTG-TCCACCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTA 3138229 Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999 || || ||| || ||| || | ||| ||||||||| |||| | |||||||| || Sbjct 3138228 GTCAGACAGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTC 3138169 Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTAC 127058 || || || |||||||||||| || || ||| | |||| |||| |||||||| Sbjct 3138168 TGGTGGGATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTG-TCGATGGTGTCCGAGG 3138110 Query 127059 TCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || || | || | ||| || || |||| || || || || |||||||| Sbjct 3138109 ACTCCACCTCCAGTGTTATCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 3138055 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| || || || ||||| ||| Sbjct 3138053 CCACCACGGAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3137994 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| ||||| || |||||| |||||||| || || || Sbjct 3137993 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGG 3137934 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| |||| |||| ||||| | |||||| Sbjct 3137933 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCGATAGTGTCGGAGGACTCGAC 3137875 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || |||||||| || || || || || || ||||| Sbjct 3137874 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 3137827 >seq3 Length=3828249 Score = 105 bits (116), Expect = 6e-18 Identities = 715/1123 (64%), Gaps = 50/1123 (4%) Strand=Plus/Plus Query 146063 GGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACG 146122 ||||||| ||||| |||||||| || || || || | | | || | ||| |||| | | Sbjct 3341235 GGTTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATG 3341294 Query 146123 GCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCA 146182 ||||||| |||||||||| || || ||||||| || | |||||||||||| |||| Sbjct 3341295 GCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCA 3341354 Query 146183 CCAGCAAAGAGTTTCTCACGCCGTG-TCTTTGAATCTTTTCC--CGTAGTTTGGACCAAT 146239 || ||| ||||| | ||||| || ||| |||||| || | || | ||| | Sbjct 3341355 TCAACAAGCTGTTTCGGATACCGTGCTCCTTG-ATCTTTGCCTTCAAAGCAT--CCCAGT 3341411 Query 146240 TCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCA-TAGTGCC-GCGGAA 146297 ||| | |||| | || | || | |||| || || | || || ||| | Sbjct 3341412 CCCAGA---GATCAGAAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGA 3341468 Query 146298 CAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGC 146357 | ||| | | |||||| | | || || ||||| | |||||| | ||||| || Sbjct 3341469 C-GGGAGAT-CCCTCGTATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGC 3341526 Query 146358 TTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCT-CCTGGCCTCCT 146416 || ||| | | ||| |||||||| |||| | ||| | ||| | ||||| Sbjct 3341527 AGTCAAAGCAGCATGGTAGATGGTCTCGAAGATCTGTTTGTTCA-GCTGGCGAGCCTCAG 3341585 Query 146417 CGCTGTCGTAGGGGATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACAC 146476 | || | || || |||| || ||||| || || |||||||| | || |||| Sbjct 3341586 GGGACTCAAAAGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCCTGGACACCAACAC 3341645 Query 146477 CAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGT 146536 ||| ||| | |||| | |||| ||||| || || ||| ||||||||| | Sbjct 3341646 CAATGGGCCTGTGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACAT 3341705 Query 146537 CGATGATCTTGTTGAGATTACGCACGACAATTT--------TCGTCAAACGATTCAGCAG 146588 | ||||||||||| | || || || || | | |||| | ||| | | | Sbjct 3341706 CAATGATCTTGTTCAAGTTGCGAACAACGACCTGGGTGACCTCGTGGA--GATGCTGGAA 3341763 Query 146589 GACATAGTCAAATGTTTTAGT-TTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCA 146647 | ||| || |||||| || | ||| | | | || | || || || ||||||| Sbjct 3341764 GTTGTAG-CAGTTGTTTTCGTAGTCAACAT--ATG--CTGGCAGA--GCAATGGAGGCCA 3341816 Query 146648 AGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGC 146707 ||| || || || ||| || | || |||| | ||||||| ||| |||||| Sbjct 3341817 GGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGG 3341876 Query 146708 TGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTT---GTTGCAGGGGTCCTTGT 146764 || |||| | |||| || || ||||| || ||| |||||||| ||||||| Sbjct 3341877 AGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCT---CTTGCGGTTGCAGGCATCCTTGT 3341933 Query 146765 AGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACAAATC-T 146823 |||||||| | || ||||| ||| | || ||||| |||| | | || | | | Sbjct 3341934 AGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATG--GCGTACCACAGCTT 3341991 Query 146824 CTG-GCCTTTACTTGTCTTTCGTACAGTTTATTCT-TTTCGTATTTCTCGTACAATATTT 146881 ||| ||||| | | ||||| || | |||| | ||||| |||||||||| | Sbjct 3341992 CTGAGCCTTCA-TGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGCCT 3342050 Query 146882 CAAAACTAG-AACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGAC 146940 | |||| | |||||| || |||||||| ||| ||||| || | || | | Sbjct 3342051 C-GAACTCGTCACCGTAGCATTCAGCAAGGCCGGGGCACTCGTTGGGGCACATGAGGGTC 3342109 Query 146941 CATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATC 147000 || || |||| || || || | ||| || | || |||||||| ||| | || | Sbjct 3342110 CAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGGGCAAGGAAG 3342169 Query 147001 AAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAA 147060 | |||||| ||| | | ||||| || ||| || ||| | ||||| || | Sbjct 3342170 AGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAATCGAGGAACTCAAAG 3342229 Query 147061 ATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGC---TTACCGCCC 147117 | || | ||||| ||||||| ||| |||| || || ||| ||||| ||| Sbjct 3342230 ACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTGTTACCACCC 3342289 Query 147118 TGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGG 147160 || || |||| || | |||| |||||||| || | ||||| Sbjct 3342290 TGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGG 3342332 >seq4 Length=3484069 Score = 102 bits (112), Expect = 8e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| || ||||| ||| || ||||| || || ||| ||||| Sbjct 949905 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 949846 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 ||||||||||| || || || ||||||||||||||| ||| || ||||| | ||| Sbjct 949845 AATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 949786 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | |||||| | |||||| || | ||| | || ||||| ||||| || || || || Sbjct 949785 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 949727 >seq2 Length=4895233 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||| | || | || ||| || || || ||||| ||| Sbjct 4675595 CCACCACGGAGGCGCAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 4675536 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || ||| |||||| |||||||| ||||| || Sbjct 4675535 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 4675476 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||||| | |||| |||||||| ||| || Sbjct 4675475 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACC 4675416 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || || || || || || || || || ||||||||| Sbjct 4675415 TCAAGGGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATG 4675368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498701852720