Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq3 279 6e-70
seq1 107 2e-18
>seq3
Length=3828249
Score = 279 bits (308), Expect = 6e-70
Identities = 1172/1830 (64%), Gaps = 39/1830 (2%)
Strand=Plus/Plus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||||||||| ||| |||| | |||||||||||||| || || ||||| |
Sbjct 3340899 TGAACTGAATGGGCGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATGCCAGTTTTGAGAC 3340958
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644
|| |||||||| | | ||||| | | |||| | || || || | ||||
Sbjct 3340959 CCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGTGGG-CTCACGCATG 3341017
Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704
|| ||| | | || || || ||||||||| || || || || | ||| | |
Sbjct 3341018 TGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCACGGTCAGCAGACATCTG---C 3341074
Query 115705 ACATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761
||| | || ||| | | |||||| || || |||| | ||| ||||| | |||
Sbjct 3341075 ACAATCGTCCTCTGGGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATATCGGCCGGG 3341134
Query 115762 ATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTT 115821
|| ||| || |||||||| ||| || | | || | | ||||||| |||
Sbjct 3341135 ATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATAATACGGTTCTTCATAGCCTCA 3341194
Query 115822 GACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAA 115877
||||| |||||||||| | || ||| | | ||| | ||||| || ||
Sbjct 3341195 GACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGG----TTGACGACCTGGAA 3341250
Query 115878 CTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATT 115937
||| || || || |||| | | |||||||| | ||||||||||| |||||||| ||
Sbjct 3341251 CTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCACTCGTT 3341310
Query 115938 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997
||| |||| || || | |||||| || || |||||||||||||| | | |||||| ||
Sbjct 3341311 GTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATCAACAAGCTGTTTCG 3341370
Query 115998 GAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-GTCT 116056
|| ||| | || | || | |||| | || |||||||| || || | | ||
Sbjct 3341371 GATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAGA-GATCAGAAGGCT 3341429
Query 116057 CCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 116116
| ||||||| ||| | || || || || || | || |||||||| ||||||
Sbjct 3341430 GGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGAGATCCCTCGTATGTCT 3341489
Query 116117 CATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTG 116176
|||||||| ||||||| || | ||| | ||| | || || || || || |
Sbjct 3341490 GGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCATGGTAGATGG 3341549
Query 116177 TCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCAC 116235
|||| || || | |||| || | | |||| ||| ||||| | | |||
Sbjct 3341550 TCTCGAAGATCTGTTTGTTCAGCTGGCGAG-CCTCAGGGGACTCAAAAGGCATGCGGAGA 3341608
Query 116236 AAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 116295
| || |||| || ||||| |||||||| | ||||| || | |||| ||| ||
Sbjct 3341609 GCCAAGAAGGCATCAGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGCATGTTG 3341668
Query 116296 GACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 116355
|| || || |||||| || || ||| || | | | || | ||
Sbjct 3341669 CTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGA 3341728
Query 116356 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG 116415
|| |||| |||| || || || | | | | | | | | | || | |
Sbjct 3341729 ACAACGACCTGGGTGACCTCGTGGAGATGCTGGAAGTTGTAGCAGTTGTTTTCGTAGTCA 3341788
Query 116416 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475
||||| || || || || || ||||| || || |||| |||||| | || |
Sbjct 3341789 ACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAG 3341848
Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535
||||| || || || || |||| || || || ||||| |||| |||||| || ||
Sbjct 3341849 TACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTG 3341908
Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595
||| ||| || ||||||||||||||||| | || | || ||||| || |||| |
Sbjct 3341909 CTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCC 3341968
Query 116596 TTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTG-GCTCGCC-CCTCC 116652
| ||| || || | ||| | | || | | || || ||| ||| | ||| ||| |
Sbjct 3341969 TCGAGGATGGCGTACCACAGCTTCTGAGCCTT---CA-TGGTCTTGCGGCCGCGGCCTTC 3342024
Query 116653 TC-CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCT-CTGAGAGCCCTG 116710
|| ||||||||| ||| || ||||| ||||| ||||| ||| | | | || || |
Sbjct 3342025 TCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGT-AGCATTCAGCAAGGCCGG 3342083
Query 116711 GTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 116770
| || | || || | ||| | ||| | || || ||||||||||||||||||||
Sbjct 3342084 GGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGA 3342143
Query 116771 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 116830
|||| || |||||||| || |||||| || || || | || || | || || |
Sbjct 3342144 GGTCAGGAATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGT 3342203
Query 116831 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 116890
| ||||| || | || || | || ||| |||||||| || |||||||| | ||||
Sbjct 3342204 TCTTTCGCAAATCGAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGA 3342263
Query 116891 TTGACCCCTTGCGACG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATA 116944
| || |||| |||| |||||| || || | || || ||| || |
Sbjct 3342264 AAGCACCAG---GACGCTTGTTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGA 3342320
Query 116945 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGT 117004
| |||||||| ||||||||||||| || ||| || || || ||| |||
Sbjct 3342321 CACGAAGCATGGGAATGATACCATTTGACGTGCCGTTGGTACCGGCTATATAAGAGCCAG 3342380
Query 117005 TGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGC 117064
|||| | || | |||| || || ||||||||| || ||| ||| ||||| ||||
Sbjct 3342381 TGGCGCGGATACGATGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGC 3342440
Query 117065 ACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC 117124
| | ||||| | ||||||| || || || |||| |||| | ||| ||||||||
Sbjct 3342441 ATGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGACGAGGAAGC 3342500
Query 117125 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 117184
| ||||| || ||| ||||||||||||||||| || || || | ||||| |||
Sbjct 3342501 ATGACGACAGCTGAGGCTGGGGTGTACCAGCGTTGAACAGCGTAGGCGATGCGTGTGTGA 3342560
Query 117185 ACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAA 117244
| | || |||||| | ||| ||||| | || || || || || |
Sbjct 3342561 AAAATTTGTGCGACATCAGGTTGTAAGTCTCAATCACTCTCTCGATATCATCTCCCCAGA 3342620
Query 117245 TACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCC 117304
|||| | | || ||||| | ||||| || || ||| | | | |||||||||
Sbjct 3342621 TACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCT 3342680
Query 117305 TCTGGAGGTAACTCTTCTCCAAGGTCTTGA 117334
| ||||||| | ||||||||||||||
Sbjct 3342681 TGAGGAGGTATGACCGCTCCAAGGTCTTGA 3342710
>seq1
Length=5395810
Score = 107 bits (118), Expect = 2e-18
Identities = 300/458 (66%), Gaps = 28/458 (6%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||||||||||||||| ||||| || | ||| ||| ||||||||
Sbjct 863268 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 863327
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345
|| || || ||||| | || || | | | |||| |||| ||||
Sbjct 863328 GAAGTCGAAGGGGTTGGTGGACTTGTAGACCTTCTCGTTG-----CCAAGGGCGACGAGG 863382
Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405
||||| || | ||| |||| ||||||| |||| | | |||||| |||| ||
Sbjct 863383 AGACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGA 863442
Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465
| || || || || || | |||| ||||||||||| | || || || || ||||
Sbjct 863443 CTGCAGGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGGCGACGGCATCA-GT--GATG 863499
Query 127466 GCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGA----AGAGTTCCACAG- 127520
|| | || || | | | || | || | | |||| | |||
Sbjct 863500 ------ATCTTCTCGACGCGCGCCTTGCTGGGGCGGTTCCTCAGGTGAGAGAACAGCAGG 863553
Query 127521 ----CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGA 127576
| || || ||| |||||||||||||| ||||| || || || |||||| |||
Sbjct 863554 CAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGG 863613
Query 127577 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAG 127636
|| ||||| ||||| |||||||||| |||||| || | || | || |||||||
Sbjct 863614 CCAGGCATCAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAG 863673
Query 127637 ATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGC 127674
|| ||||| ||| ||||| |||| ||||||| |||
Sbjct 863674 ATACCCTCAACAGCAGCGAAGGCAACCAGACGCTGGGC 863711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613504492899480
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