Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 8e-32
seq3 105 1e-17
>seq1
Length=5395810
Score = 152 bits (168), Expect = 8e-32
Identities = 337/500 (67%), Gaps = 13/500 (3%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| | | ||| || |||||||| |||| |||||
Sbjct 863283 CTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATGAAGTCGAAGGGGTT 863342
Query 159709 CTTC-ACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767
| || || ||| |||| || || || | || | | ||| ||||| || |
Sbjct 863343 GGTGGACTTG-TAGACCTTCTCGTTGCCAAGGGCGACGAGGAGACGGTCGGCCACGAACT 863401
Query 159768 CGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826
||||||| || | |||| | | ||| || || ||||| || ||| || || ||
Sbjct 863402 CGATGTA-CTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGACTGCAGGGAAGAGCCTCA 863460
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTAC 159886
| ||| |||||||||||||| |||| || || || | |||| | ||| || | |
Sbjct 863461 GTCAGGAACTCCTTCTCAATGGCGACGGCATCAGTGATGATCTTCTCGACGCGCGCCTTG 863520
Query 159887 CCCGGC---TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943
| || || | || ||| ||||| ||||| || |||||| ||||||
Sbjct 863521 CTGGGGCGGTTCCTCA------GGTGAGAGAACAGCAGGCAGGCGAAGTCGGTGTGCAGA 863574
Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003
|||||||| |||||||| | ||||||||| | | | ||||| ||||| | || |||
Sbjct 863575 CCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGACCGCGCTTC 863634
Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063
|| ||||| || |||| || ||||||||||| || ||||| ||||| || || || ||
Sbjct 863635 TTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCTCAACAGCAGCGAAG 863694
Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123
|| || || | || | | | || | | ||| | ||||| | |||||| ||
Sbjct 863695 GCAACCAGACGCTGGGCGTAGGTGGACTCGTGGTCCGTGATCCACTTCAGGGCCCAGTCG 863754
Query 160124 GCCTTCTTTGCGATGCACGG 160143
|||||||| |||||| ||
Sbjct 863755 GCCTTCTTACGGATGCAGGG 863774
>seq3
Length=3828249
Score = 105 bits (116), Expect = 1e-17
Identities = 328/496 (66%), Gaps = 10/496 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGG-CGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATG 203896
|| ||| || ||||||||||||| || | || | ||||| | | || |||||||||
Sbjct 3340888 CTGGTCGACAGTGAACTGAATGGGCGCTGCCGCC--GCCTGAGTGCGGAGGTAGTACATG 3340945
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| || || || ||| || ||| ||| | ||||||| || | |||| || ||
Sbjct 3340946 CCAGTTTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGTG 3341005
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015
|| || |||||| ||||| |||||||| ||||||||| ||||| || || || ||
Sbjct 3341006 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATG-AAGGCACCACGGTCAGC 3341064
Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075
| ||| | | ||| ||| |||| || | ||||| || |||||| ||| | || |
Sbjct 3341065 AGACATCTGCACAATCGTCCTCTGGGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGAT 3341124
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
| || | || | || || ||| || || | ||||| || | | ||
Sbjct 3341125 ATCGGCCGGGA-TGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATAATACGGTTCT 3341183
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | |||| ||||| | |||| || |||| |||| | || |||||||| |
Sbjct 3341184 TCATAGCCTCAGACCACA-GACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACG 3341242
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || || | ||||| | ||| | | | ||| |||| |||| |||||
Sbjct 3341243 ACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAG 3341302
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
|||||||||||| | |||||| | ||| || || |||||||| |||| | || |
Sbjct 3341303 CACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATCAACAAG 3341362
Query 204314 GAGTTGCGCACACCGT 204329
||| || | |||||
Sbjct 3341363 CTGTTTCGGATACCGT 3341378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795151691377680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |