Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq109 149 5e-30
seq6 86.0 5e-11
seq2 86.0 5e-11
>seq109
Length=4663
Score = 149 bits (164), Expect = 5e-30
Identities = 209/290 (72%), Gaps = 5/290 (2%)
Strand=Plus/Minus
Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT-CC 518085
|||||||| ||||||||||| | ||| ||| || |||| |||| |||||| ||
Sbjct 2129 TCAAAATCATCACCTCCCAAAGCATTATCTCCAGAAGTAGAAAGCACTTC-AAAAGTACC 2071
Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145
|| | | || | || || |||||| ||||| || || | ||||| | | |
Sbjct 2070 GTCAACCAAAGTTAGAATAGAAACATCAAAAGTTCCTCCTCCTAAGTCAAACACTAAAAT 2011
Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205
|| ||||||||| ||| |||| |||||| | || |||||| |||||||||||
Sbjct 2010 GGTCTGTTCTTTGTCACC---TTTGTCAACACCATAAGAAAGAGCAGCTGCAGTTGGTTC 1954
Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265
|||||||| | |||||| | || |||||| | ||||||||||| || || |||||
Sbjct 1953 GTTAATAATACGTTCAACATTTAAGCCTGCAATTTTACCTGCATCTTTGGTAGCCTGTCT 1894
Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTT 518315
||| | ||| |||||||| |||||||||||||| || || | | ||||||
Sbjct 1893 TTGAGCATCATTAAAATAAGCAGGAACAGTAATTACTGCCTTACTTACTT 1844
Score = 118 bits (130), Expect = 8e-21
Identities = 414/638 (65%), Gaps = 40/638 (6%)
Strand=Plus/Minus
Query 517096 ATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTCAAA 517155
||||||| |||||| | ||||| | |||||||| |||||| || ||
Sbjct 3054 ATTTTCTGCTTCATTACGAACATCAATACTTTCTTTTTTCAAACGATCTGCCTCAGCATT 2995
Query 517156 TTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTC----AGAGAATCTTCCGCGAT 517211
||||| ||||||||||||||||| | ||||| ||||| || | | || | |
Sbjct 2994 TTCTTCGGCTTCTCTAATCATTCTTTTAATTTCTTCTTCTTTAAGGGCA----CCAC--T 2941
Query 517212 TATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAA 517271
| | | ||||||||| || | |||||| || | || ||| | || |
Sbjct 2940 TCCT-GAAATAGTAATTTTTTGTTCTTTGTTAGTGCCTAAGTCTTTGGCTTTAACTGATA 2882
Query 517272 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 517331
||| ||||| ||||||| ||||| || |||||||||||||| | || | | || |
Sbjct 2881 CAATTCCATTTGCATCCAGGTCAAAAGTAACTTCAATTTGAGGAATTCCGCGAGGTGCTG 2822
Query 517332 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 517391
|||| || || || | ||| |||||| | | |||||||| | || ||||
Sbjct 2821 GTGGAATATCTGTTAATTGGAATCTTCCCAAAGTTTTATTATCAGCTGCTAAAGGACGTT 2762
Query 517392 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 517451
| || | |||| || ||| ||| | | |||||| |||| ||||| ||| |||
Sbjct 2761 CTCCTTGTAAAACATGAATATCTACTGCTGGTTGATTGTCTGCGGCAGTTGAAAAGACT- 2703
Query 517452 TGGATTTTTTACA---AGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCAC 517508
|| ||||||| | ||||| || || ||||| ||||| | || || | | | ||
Sbjct 2702 TG--TTTTTTAGATGTTGGAATAGTAGTATTTCTTTCAATTAATTTAGTAAAGACATTAC 2645
Query 517509 CTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTT 517568
|| ||||| | || | |||||| ||||| ||||| | || | ||||| || || |
Sbjct 2644 CTAAAGTTTCAATTCCTAAAGAAAGTGGAGTTACATCTAAAAGTAAAATATCTTTAACGT 2585
Query 517569 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628
| | ||| ||||| || ||||||||||||| ||| ||||| |||
Sbjct 2584 CTCC-------TGA-----TAGAATTCCTCCTTGAATAGCAGCTCCAATAGCAACTACTT 2537
Query 517629 CATCAGGATTAACAGTTTCATT--TAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTG 517686
|||| ||||||| | | | ||| |||||||| | ||| | ||| || ||
Sbjct 2536 CATCGGGATTAATACTCTTATTAGGAGTTTTTTTCAATT----CACTTTTAACTAA---A 2484
Query 517687 TCTT--ACCTTAGGAATACGAGATGATCCTCCAACTAA 517722
|||| || ||||||||||| || || ||||||||
Sbjct 2483 TCTTGAACTGCAGGAATACGAGTAGAACCACCAACTAA 2446
Score = 98.7 bits (108), Expect = 8e-15
Identities = 150/213 (70%), Gaps = 12/213 (6%)
Strand=Plus/Minus
Query 322163 GAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTACGTTACCACCAGtttttttA 322222
|||||||| ||||| || ||||||||||| | || | | | | | ||| |||
Sbjct 2051 GAAACATCAAAAGTTCCTCCTCCTAAGTCAAACACTAAAATGGT-----CTGTTCTTTGT 1997
Query 322223 TTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATT 322282
|| ||| ||| | ||| || | |||||| |||||||||||||| ||||| ||
Sbjct 1996 CACC-TTTGTCA------ACACCATAAGAAAGAGCAGCTGCAGTTGGTTCGTTAATAATA 1944
Query 322283 TTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCA 322342
||||| ||| || ||||||||| | | ||| || || ||||| || || |||
Sbjct 1943 CGTTCAACATTTAAGCCTGCAATTTTACCTGCATCTTTGGTAGCCTGTCTTTGAGCATCA 1884
Query 322343 TTAAAATATGCTGGTACAGTAATAACTGCTTTA 322375
|||||||| || || |||||||| ||||| |||
Sbjct 1883 TTAAAATAAGCAGGAACAGTAATTACTGCCTTA 1851
>seq6
Length=3351076
Score = 86.0 bits (94), Expect = 5e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914
|| || || |||||| || |||| || ||||||||||| ||||| ||| | ||||| |||
Sbjct 801084 GGCAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGAAAGCGTGTGGATTTCTCTGCCCGT 801025
Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCC 668964
|| || ||||| |||| | |||||| |||| | ||||| ||||| ||
Sbjct 801024 ACCGTCATTACAGGTGATGCAAATATTTCTCTGGACGAAGTCGGTGTACC 800975
>seq2
Length=4895233
Score = 86.0 bits (94), Expect = 5e-11
Identities = 96/126 (76%), Gaps = 2/126 (2%)
Strand=Plus/Minus
Query 366994 GTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATT 367053
|| || |||||||| || ||||||||||| ||| ||||||| |||||| | |||| ||
Sbjct 1211057 GTTGTTGCCACAATCGCTTTTGGTATGGGCATTGATAAACCTGATGTTCGCTTTGTGATA 1210998
Query 367054 CATTATGGAGCTCCCAAGAATATT-GAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112
||| || | ||||||| || || ||||| || || || |||| || |||| |||||
Sbjct 1210997 CATCAT-TATCTCCCAAAAAGCTTGGAAGGCTACTACCAGGAAACAGGACGAGCCGGTCG 1210939
Query 367113 TGATGG 367118
|||||
Sbjct 1210938 AGATGG 1210933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780804882977218
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |