Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3 367 2e-96 seq5 147 3e-30 seq6 127 3e-24 seq4 107 2e-18 >seq3 Length=3828249 Score = 367 bits (406), Expect = 2e-96 Identities = 920/1392 (66%), Gaps = 17/1392 (1%) Strand=Plus/Plus Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 || |||| ||||| || |||||||||||||| | || | || || || ||| | Sbjct 2922789 ACGTTCATGATACCGTTGGCATCAACATCGAAGGTGACCTCGATCTGAGGAACACCACGG 2922848 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814 ||||||| ||||| || || | || || | || || | |||| ||| | | | Sbjct 2922849 GGTGCGGGGGGAATGCCGGTAAGCTCGAACTTGCCGAGCAGGTTGTTGTCCTTGGTGCGC 2922908 Query 6815 TTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAG 6874 | ||| ||||| || ||||| | || || |||| || || || || ||| Sbjct 2922909 TGACGCTCACCCTCGTAGACCTGGATGAGGACACCAGGCTGGTTGTCGGAGAAGGTAGAG 2922968 Query 6875 AAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATA 6934 |||| | ||||| | ||||| || || || | || || | | |||||| ||| Sbjct 2922969 AAGACCTCGGACTTCTTGGTGGGAATGGTGGTGTTGCGAGGGATGAGCTTGGTCATCATA 2923028 Query 6935 CCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGA 6994 ||||| || || | || |||||||| |||| || |||| || | | || | Sbjct 2923029 CCACCAGCGGTCTCAATACCCAGAGACAGCGGTGCGACATCCAGAAGCAGGATCTCGTTG 2923088 Query 6995 ACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCG 7051 || | | | ||||| | | ||||||||| ||||| | || ||||| || Sbjct 2923089 GTGGACTTGGAGCTGGTGTCACCAGACAGGATGGCGGCCTGGACGGCGGCACCGTAGGCA 2923148 Query 7052 ACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAAC 7111 || |||||||||||||| || | || || | || || ||||| || || |||| | | Sbjct 2923149 ACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGTAGTCCGTGATC 2923208 Query 7112 ATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTC 7171 | | || || ||||| || || || || ||||||| ||||| || | || | Sbjct 2923209 AGCTTCTGGATACGGGGGATACGGGTAGAACCTCCGACCAGGACGATCTCGTGGACCTGA 2923268 Query 7172 GATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGG 7228 || || |||||||| | ||| || || || || | || || | ||| Sbjct 2923269 GACTTGTCGATCTTGGCGTCGGTCAGGACACGGTCAACGGGCTGCAGGGTAGAG---CGG 2923325 Query 7229 AACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACG 7288 || | |||| || || ||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct 2923326 AAGAGGTCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCAACA 2923385 Query 7289 CCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTT 7348 || || | | || || || || |||| || || || | || || | |||||||| Sbjct 2923386 CCCTCAAACAGGGAGTCGATCTCGATGGAAGTCTGAGCGGAAGAGGACAGAGTTCGCTTA 2923445 Query 7349 GCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTC 7408 || ||||| || || || || | |||||| || ||||| ||||| | | || ||| Sbjct 2923446 GCACGCTCGCAAGCAGTGCGGAGACGACGCAGAGCACGAGGGTTGGAGCTCAAGTCCTTC 2923505 Query 7409 TTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTC 7467 || ||| ||||| || || || | | ||||| | ||| | ||||| || || Sbjct 2923506 TTGAATTTCCGTTTGAATTCGTTTACA-AAGTGGTTGACGAGACGGTTGTCGAAGTCCTC 2923564 Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 ||||||||| || || || || ||||| | ||||| || |||||||| | || ||| | Sbjct 2923565 ACCACCCAAATGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCCTCCTCGATGGT 2923624 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | || || ||||| || |||||||||||||| || || ||||| ||||| ||| | Sbjct 2923625 CAGCAGGGACACATCGAAGGTACCACCACCCAGATCGAAGATGAGGACGTTGCGCTCGCC 2923684 Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 || ||||| ||||||||||| |||||||| || || || || || || || ||||| Sbjct 2923685 CTCGACCTTCTTGTCGAGACCGTAAGCGATAGCGGCAGCGGTAGGCTCGTTGATGATACG 2923744 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 ||| ||||||||||||||| | || || || || ||||| || || || ||||| Sbjct 2923745 GAGAACGTTCAGGCCAGCAATGAGACCGGCGTCCTTGGTGGCTTGACGCTGAGAGTCGTT 2923804 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 |||||||| || || || ||||| |||| | || | ||| || || | || || Sbjct 2923805 GAAGTAGGCAGGAACGGTGACGACAGCGTTGTTAACGGTGCCACCCAGGTATGCCTCAGC 2923864 Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827 | | || ||| ||||| || ||||| || || ||||| || | | || | || || Sbjct 2923865 GGTCTCACGCATCTTGGTCAGGACCATAGAGGAGATCTCCTCGGGGGTGAAGTTCTTGGT 2923924 Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887 || || || || || || ||||| | || ||| |||| | || |||||| | Sbjct 2923925 CTCGCCCTTGAACTCGACCTCAATGACAGGCTTA---CCAGCCTTGTCGACAACCTTGAA 2923981 Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947 | | | ||||| ||| | || |||| ||| |||||| | || || | || Sbjct 2923982 GGGGAAGTGCTTCATGTCGGCCTGAACCTCAGAGTCGACAAACTTGCGACCAATCAACCG 2924041 Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007 ||| || || || || ||||| | ||||||||| || |||||||| || || || || Sbjct 2924042 CTTCGCGTCGAAGACGGTGTTGTGGGGGTTCATAGCGACCTGGTTCTTGGCGGCATCTCC 2924101 Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067 ||| | ||| || | || || || |||||| | || || || || || || || || Sbjct 2924102 GATCAAACGCTC---GGTGTCGGTGAAAGCGACGAAAGAGGGTGTTGTGCGGTTACCCTG 2924158 Query 8068 GTCGTTCGCAAT 8079 |||||| || || Sbjct 2924159 GTCGTTGGCGAT 2924170 >seq5 Length=3440085 Score = 147 bits (162), Expect = 3e-30 Identities = 246/355 (69%), Gaps = 3/355 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| ||||| || || || || ||| ||||||| ||| Sbjct 3037741 TCGAAATCCTCACCACCAAGGTGGGTATCACCGGCAGTAGCCAAGACCTCAAAGACACCC 3037800 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | || ||||| || ||||||||||| || || | | || | Sbjct 3037801 TGGTCGATAGAGAGAAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGACGATGATC 3037860 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || |||| | |||| || || |||||||||||||| || ||||| || || Sbjct 3037861 TGACGCTCACCGTC---GGTCTTGTCCAGGCCGTACGCGATAGCGGCAGCCGTGGGCTCG 3037917 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | |||||| || ||| || || || ||| || | ||||| || || || || || Sbjct 3037918 TTGACAATACGGAGGACGTTGAGACCGGCGATAATTCCGGCATCCTTGGTAGCCTGACGC 3037977 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| |||||||| ||||| || ||||| |||| ||||| ||||| ||||| Sbjct 3037978 TGGTTGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTCTTTCCGAGG 3038037 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || || || || | || ||||| ||| | || ||| | || ||||| |||| Sbjct 3038038 TAAGACTCGGCCACCTCCTTCATCTTGCCCAAAATCATGGCGGAGATCTCCTCAG 3038092 >seq6 Length=3351076 Score = 127 bits (140), Expect = 3e-24 Identities = 343/520 (66%), Gaps = 11/520 (2%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAAT--GGATGTATAGAAATCAACGCCGTCGTATAAC 7300 ||| ||||| ||||| ||||| || || | |||| ||| || |||| ||| | | Sbjct 767514 CAGGTCCTCGAAACGGGCACGAGTGATCTGCATGTT--GAAGTCCTCGCCATCGAAGAGA 767457 Query 7301 GAATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 || || || |||||||| | || || || | ||| || ||||| || ||||| | Sbjct 767456 GAGTCGATCTCAATGGTGGCCTGGGCACCGCTGGAGAGG--GTACGCTTGGCACGCTCGC 767399 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 | || || || | | || || ||||| | | ||||| | || ||||| || | Sbjct 767398 AAGCGGTACGGAGTCTTCGCAGAGCACGGGCATCTCCGGAGAGGTCCTTCTTGGTCTTGC 767339 Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 | ||||| | | |||| || || | | |||||||| | ||||||||||| Sbjct 767338 GGGAGAACTCCTTCTTGCAGTGGTCCAGCAGGTTGGTGTCGAAATCCTGACCACCCAAGT 767279 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538 | || || || ||||| || ||||| |||| ||| || | ||||| | | || | Sbjct 767278 GGGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCACCCTGGATGTTAAGGAGAGAGA 767219 Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGT 7595 |||| || |||||||||||||| || | || || ||||| | | || | |||| Sbjct 767218 CATCGAAAGTACCACCACCCAGATCGTAGATCAGGACGTTGCGCTCCTTGTTGGACTTGT 767159 Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 | |||||||||| |||||||| || || || || || || || ||||| || || Sbjct 767158 TGGAGCCGAGACCGTAGGCGATAGCGGCAGCGGTGGGCTCGTTGATGATACGGAGGACGT 767099 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 | || || | || | | || || || || || || || || ||||| ||||||| Sbjct 767098 TAAGACCGGAGATGGAACCGGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGG 767039 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 | ||||| || | ||| || | | ||| ||||| || || Sbjct 767038 CAGGGACGGTGATGACGGCCTTCTCGACCTTCTTGCCCAG 766999 >seq4 Length=3484069 Score = 107 bits (118), Expect = 2e-18 Identities = 219/326 (67%), Gaps = 6/326 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||| | ||||| || |||| ||| Sbjct 2856946 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGTTGGTAGACTTGACCTCGAAGACACCG 2857005 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || | | || || | ||| || ||||||||||| || || ||| ||| Sbjct 2857006 TTCTGGATCTCCAGCACGGAGATATCGAAGGTACCACCACCAAGATCGTAAACAGCGACG 2857065 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | ||| ||||||||||| |||| || || || || || || Sbjct 2857066 A------CGCGGTCAGCCTCCTTCTCGAGACCGTAAGCGAGGGCAGCAGCGGTAGGCTCG 2857119 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | ||| ||| |||||||||||| || | ||||| || || ||||| || Sbjct 2857120 TTCACGACACGGAGAACGTTCAGGCCAGCGATCTGACCGGCATCCTTGGTAGCTTGGCGC 2857179 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || || || |||| | |||| ||| | ||| Sbjct 2857180 TGGGAGTCGTTGAAGTAGGCGGGGACGGTAACAACAGCGTTCTTGACGGGCTTGCTGAGG 2857239 Query 7757 TACGATTCCGCGATATCTTTCATTTT 7782 || | || || | || ||||| || Sbjct 2857240 TAGGCCTCGGCAGTCTCCTTCATCTT 2857265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129997476520