Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq3 360 2e-94
seq1 109 7e-19
>seq3
Length=3828249
Score = 360 bits (398), Expect = 2e-94
Identities = 1162/1777 (65%), Gaps = 45/1777 (3%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|||||| ||||| ||||||| || || | |||||| || || ||||| || ||
Sbjct 3342654 CCACAGCACATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGATGATATCGAGAGAGTG 3342595
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
| ||||| ||| || |||||| | | |||| |||||| | || || || |||
Sbjct 3342594 ATTGAGACTTACAACCTGATGTCGCACAAATTTTTCACACACGCATCGCCTACGCTGTTC 3342535
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
|||||||||||||| || || |||| || ||||| | | | ||||| ||
Sbjct 3342534 AACGCTGGTACACCCCAGCCTCAGCTGTCGTCATGCTTCCTCGTCGACATGAAGGATGAC 3342475
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851
|| | || || |||| ||||||| ||| ||| ||||| ||| ||| ||
Sbjct 3342474 AGCATTGAGGGTATCTACGATACTCTCAAGACATGCGCCATGATCTCCAAGATGGCCGGA 3342415
Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACAA 111909
||||| || || || ||||| | || | |||| | ||| ||| ||| ||||| |
Sbjct 3342414 GGTATTGGTCTGAACGTCCATCGTATCCGCGCCACT--GGCTCTTATATAGCCGGTACCA 3342357
Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969
| || ||| ||||||| ||||| |||||||| || || ||| ||| || || || |
Sbjct 3342356 ACGGCACGTCAAATGGTATCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTACG 3342297
Query 111970 TAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 112023
| |||| | ||| | |||| || || |||| |||| || ||||||||||
Sbjct 3342296 TTGACCAGGGTGG---TAACAAGCGTCCTGGTGCTTTCGCTATCTACCTGGAGCCATGGC 3342240
Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083
|||| ||| || | |||||||| || ||||| ||||| ||| | ||||||| |||
Sbjct 3342239 ACGCTGATGTCTTTGAGTTCCTCGATTTGCGAAAGAACCACGGTAAGGAGGAGGTCCGGG 3342180
Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143
|||||| |||||| || ||||||||||| || |||||||||||| | |||||| |||
Sbjct 3342179 CCCGCGACCTCTTCCTTGCCCTCTGGATTCCTGACCTCTTCATGAAGCGGGTTGAGAAGA 3342120
Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203
||| | ||| | ||| | || || || || ||||| || | || | ||||
Sbjct 3342119 ACGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTTGCTGAATGCTACGGTG 3342060
Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGT 112261
| ||||| || || || ||| ||||||||| |||| | | ||| | || ||| |
Sbjct 3342059 ACGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCC--GCGGCCGCAAGACCAT 3342002
Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
| ||| | || | ||||| | || || ||| || | || |||||||| || | || |
Sbjct 3342001 GAAGGCT-CAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGGCAACCCCT 3341943
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
||||| ||||| || ||||| |||| ||||| || || ||||| |||| |||
Sbjct 3341942 TCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCATCC 3341883
Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440
|| |||||||| || || || ||| | || | | |||||| |||||| |
Sbjct 3341882 GCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGGTGGCTGTCT 3341823
Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGAT 112499
| ||||| || || || ||||| || ||||| || | | | |||| | | |
Sbjct 3341822 GCAACCTGGCCTCCATTGCTCTGCCAGCATATGTTGACTACGAAAACAACTGC-TACAAC 3341764
Query 112500 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559
| | | |||||||| || || | || ||| | |||| | ||||||
Sbjct 3341763 TTCCAGCATCTCCACGAGGTCACCCAGGTCGTTGTTCGCAACTTGAACAAGATCATTGAT 3341704
Query 112560 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619
|| |||||||| || || || || ||| ||||| | || ||||||
Sbjct 3341703 GTCAACCACTACCCCGTGAAGGAGGCATACAACAGCAACATGCGACACAGGCCCATTGGT 3341644
Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGA 112678
| |||||||| ||||| || |||| ||| || | || || | | ||||| |||
Sbjct 3341643 GTTGGTGTCCAGGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCTTTTGAGTCCCC 3341585
Query 112679 CGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GG 112737
|| || | | || | || || ||||| || || || || ||| |||| |
Sbjct 3341584 TGAGGCTCGCCAGCTGAACAAACAGATCTTCGAGACCATCTACCATGCTGCT-TTGACTG 3341526
Query 112738 CGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797
|| || || | || ||||||| || ||||| | || | ||||| ||||| | |
Sbjct 3341525 CGTCTTGCGACATCGCCAAGGTTGACGGCCCATACCAGACATACGAGGGATCTCCCGTCT 3341466
Query 112798 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGG 112857
| || || |||||||| ||| ||||||| | || | || || |||||||
Sbjct 3341465 CGCAGGGACAGCTTCAATATGACATGTGGGGCGTCCAGCCTTCTGATCTCTGGGACTGGG 3341406
Query 112858 ACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 112917
| ||| | |||| | ||||||||| | ||| | || ||||| | ||||||||||| |
Sbjct 3341405 ATGCTTTGAAGGCAAAGATCAAGGAGCACGGTATCCGAAACAGCTTGTTGATGGCACCCA 3341346
Query 112918 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 112977
|||| || || ||||| | || || |||| || || || ||||| || || |||||
Sbjct 3341345 TGCCTACCGCATCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCT 3341286
Query 112978 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCATC 113034
| |||||||| | | || | || || || ||||| | | ||||| | || |
Sbjct 3341285 CTAACATCTACCAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTAC 3341226
Query 113035 TCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGA 113094
|| | ||||| | |||||||||||| ||||| ||| ||||||| | | || |
Sbjct 3341225 TCAGG---GACCTGACAGAGATTGGTCTGTGGTCTGAGGCTATGAAGAACCGTATTATTG 3341169
Query 113095 AAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACC 113154
| | |||||| || || || || || || | || || ||| ||||||
Sbjct 3341168 CCGAAGATGGTTCTATCCAGAACATCCCCAGCATCCCGGCCGATATCAAGGCTTTGTACA 3341109
Query 113155 GCACAGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTC 113211
|| || |||||| | | ||| || | || | | ||| | || || ||||||
Sbjct 3341108 AGACCGTCTGGGAAGTCTCCCAGAGGACGATTG---TGCAGATGTCTGCTGACCGTGGTG 3341052
Query 113212 GCTTCATTGATCAAAGTCAAAG--TATGAATCTATTCATG-GAAAGTCCAACGATGTCCA 113268
|||||| || | |||| || | | || | |||| | || || || ||| ||
Sbjct 3341051 CCTTCATCGACC--AGTCGCAGTCTCTCAACATCCACATGCGTGAG-CCCACTATGGGCA 3340995
Query 113269 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 113328
|| || || |||||| | | | |||||| |||||||||||| || ||||| ||||
Sbjct 3340994 AGATCACTAGCATGCACTTCACCGGCTGGAAGCTGGGTCTCAAAACTGGCATGTACTACC 3340935
Query 113329 TCCGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 113364
|||| || |||| ||| |||||| ||||||||||
Sbjct 3340934 TCCGCACTCAGGCGGCGGCAGCGCCC-ATTCAGTTCA 3340899
>seq1
Length=5395810
Score = 109 bits (120), Expect = 7e-19
Identities = 95/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 102262
||||||||||||||||||| ||| | ||| | | || | ||||| |||||||| ||
Sbjct 863685 TGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGG 863626
Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320
||| ||||| || || ||||||||||||||| ||||||||||||||||| || |||
Sbjct 863625 TCTGATGCCTGGCCTGACCTTCTCCAACGAGCTGATCTCTCGTGACGAGGGTCTGCAC 863568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620739660974160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |