Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3 360 2e-94 seq1 109 7e-19 >seq3 Length=3828249 Score = 360 bits (398), Expect = 2e-94 Identities = 1162/1777 (65%), Gaps = 45/1777 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| ||||||| || || | |||||| || || ||||| || || Sbjct 3342654 CCACAGCACATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGATGATATCGAGAGAGTG 3342595 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| || |||||| | | |||| |||||| | || || || ||| Sbjct 3342594 ATTGAGACTTACAACCTGATGTCGCACAAATTTTTCACACACGCATCGCCTACGCTGTTC 3342535 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 |||||||||||||| || || |||| || ||||| | | | ||||| || Sbjct 3342534 AACGCTGGTACACCCCAGCCTCAGCTGTCGTCATGCTTCCTCGTCGACATGAAGGATGAC 3342475 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || || |||| ||||||| ||| ||| ||||| ||| ||| || Sbjct 3342474 AGCATTGAGGGTATCTACGATACTCTCAAGACATGCGCCATGATCTCCAAGATGGCCGGA 3342415 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACAA 111909 ||||| || || || ||||| | || | |||| | ||| ||| ||| ||||| | Sbjct 3342414 GGTATTGGTCTGAACGTCCATCGTATCCGCGCCACT--GGCTCTTATATAGCCGGTACCA 3342357 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || ||| ||||||| ||||| |||||||| || || ||| ||| || || || | Sbjct 3342356 ACGGCACGTCAAATGGTATCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTACG 3342297 Query 111970 TAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | |||| | ||| | |||| || || |||| |||| || |||||||||| Sbjct 3342296 TTGACCAGGGTGG---TAACAAGCGTCCTGGTGCTTTCGCTATCTACCTGGAGCCATGGC 3342240 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 |||| ||| || | |||||||| || ||||| ||||| ||| | ||||||| ||| Sbjct 3342239 ACGCTGATGTCTTTGAGTTCCTCGATTTGCGAAAGAACCACGGTAAGGAGGAGGTCCGGG 3342180 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 |||||| |||||| || ||||||||||| || |||||||||||| | |||||| ||| Sbjct 3342179 CCCGCGACCTCTTCCTTGCCCTCTGGATTCCTGACCTCTTCATGAAGCGGGTTGAGAAGA 3342120 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203 ||| | ||| | ||| | || || || || ||||| || | || | |||| Sbjct 3342119 ACGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTTGCTGAATGCTACGGTG 3342060 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGT 112261 | ||||| || || || ||| ||||||||| |||| | | ||| | || ||| | Sbjct 3342059 ACGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCC--GCGGCCGCAAGACCAT 3342002 Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | ||| | || | ||||| | || || ||| || | || |||||||| || | || | Sbjct 3342001 GAAGGCT-CAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGGCAACCCCT 3341943 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| || ||||| |||| ||||| || || ||||| |||| ||| Sbjct 3341942 TCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCATCC 3341883 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || |||||||| || || || ||| | || | | |||||| |||||| | Sbjct 3341882 GCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGGTGGCTGTCT 3341823 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGAT 112499 | ||||| || || || ||||| || ||||| || | | | |||| | | | Sbjct 3341822 GCAACCTGGCCTCCATTGCTCTGCCAGCATATGTTGACTACGAAAACAACTGC-TACAAC 3341764 Query 112500 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559 | | | |||||||| || || | || ||| | |||| | |||||| Sbjct 3341763 TTCCAGCATCTCCACGAGGTCACCCAGGTCGTTGTTCGCAACTTGAACAAGATCATTGAT 3341704 Query 112560 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619 || |||||||| || || || || ||| ||||| | || |||||| Sbjct 3341703 GTCAACCACTACCCCGTGAAGGAGGCATACAACAGCAACATGCGACACAGGCCCATTGGT 3341644 Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGA 112678 | |||||||| ||||| || |||| ||| || | || || | | ||||| ||| Sbjct 3341643 GTTGGTGTCCAGGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCTTTTGAGTCCCC 3341585 Query 112679 CGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GG 112737 || || | | || | || || ||||| || || || || ||| |||| | Sbjct 3341584 TGAGGCTCGCCAGCTGAACAAACAGATCTTCGAGACCATCTACCATGCTGCT-TTGACTG 3341526 Query 112738 CGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797 || || || | || ||||||| || ||||| | || | ||||| ||||| | | Sbjct 3341525 CGTCTTGCGACATCGCCAAGGTTGACGGCCCATACCAGACATACGAGGGATCTCCCGTCT 3341466 Query 112798 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGG 112857 | || || |||||||| ||| ||||||| | || | || || ||||||| Sbjct 3341465 CGCAGGGACAGCTTCAATATGACATGTGGGGCGTCCAGCCTTCTGATCTCTGGGACTGGG 3341406 Query 112858 ACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 112917 | ||| | |||| | ||||||||| | ||| | || ||||| | ||||||||||| | Sbjct 3341405 ATGCTTTGAAGGCAAAGATCAAGGAGCACGGTATCCGAAACAGCTTGTTGATGGCACCCA 3341346 Query 112918 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 112977 |||| || || ||||| | || || |||| || || || ||||| || || ||||| Sbjct 3341345 TGCCTACCGCATCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCT 3341286 Query 112978 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCATC 113034 | |||||||| | | || | || || || ||||| | | ||||| | || | Sbjct 3341285 CTAACATCTACCAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTAC 3341226 Query 113035 TCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGA 113094 || | ||||| | |||||||||||| ||||| ||| ||||||| | | || | Sbjct 3341225 TCAGG---GACCTGACAGAGATTGGTCTGTGGTCTGAGGCTATGAAGAACCGTATTATTG 3341169 Query 113095 AAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACC 113154 | | |||||| || || || || || || | || || ||| |||||| Sbjct 3341168 CCGAAGATGGTTCTATCCAGAACATCCCCAGCATCCCGGCCGATATCAAGGCTTTGTACA 3341109 Query 113155 GCACAGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTC 113211 || || |||||| | | ||| || | || | | ||| | || || |||||| Sbjct 3341108 AGACCGTCTGGGAAGTCTCCCAGAGGACGATTG---TGCAGATGTCTGCTGACCGTGGTG 3341052 Query 113212 GCTTCATTGATCAAAGTCAAAG--TATGAATCTATTCATG-GAAAGTCCAACGATGTCCA 113268 |||||| || | |||| || | | || | |||| | || || || ||| || Sbjct 3341051 CCTTCATCGACC--AGTCGCAGTCTCTCAACATCCACATGCGTGAG-CCCACTATGGGCA 3340995 Query 113269 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 113328 || || || |||||| | | | |||||| |||||||||||| || ||||| |||| Sbjct 3340994 AGATCACTAGCATGCACTTCACCGGCTGGAAGCTGGGTCTCAAAACTGGCATGTACTACC 3340935 Query 113329 TCCGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 113364 |||| || |||| ||| |||||| |||||||||| Sbjct 3340934 TCCGCACTCAGGCGGCGGCAGCGCCC-ATTCAGTTCA 3340899 >seq1 Length=5395810 Score = 109 bits (120), Expect = 7e-19 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 102262 ||||||||||||||||||| ||| | ||| | | || | ||||| |||||||| || Sbjct 863685 TGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGG 863626 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||| ||||| || || ||||||||||||||| ||||||||||||||||| || ||| Sbjct 863625 TCTGATGCCTGGCCTGACCTTCTCCAACGAGCTGATCTCTCGTGACGAGGGTCTGCAC 863568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739660974160