Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq109 129 5e-24
>seq109
Length=4663
Score = 129 bits (142), Expect = 5e-24
Identities = 310/463 (67%), Gaps = 32/463 (7%)
Strand=Plus/Plus
Query 552123 GTGCTT---GTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTAT 552179
|||||| |||||||| ||||| | |||||| | ||| || || |||| |
Sbjct 2440 GTGCTTTTAGTTGGTGGTTCTACTCGTATTCCTGCAGTTCAAGA----TTTAGTTAAAAG 2495
Query 552180 TTCAATGGTAAAAAATTA--AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTG 552237
| ||| | |||||| | ||| | ||| ||||||| ||||| | ||||| ||| |
Sbjct 2496 TG-AATTGAAAAAAACTCCTAATAAGAGTATTAATCCCGATGAAGTAGTTGCTATTGGAG 2554
Query 552238 CCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTAC 552297
| || ||||||| || ||||| || ||| || | ||| ||||| |||
Sbjct 2555 CTGCTATTCAAGGAGGAATTCTATCAGGA------GACGTTAAAG------ATATTTTAC 2602
Query 552298 TTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATC 552357
|| ||||||| ||||| || ||| | || | ||||| | || | | | |||||
Sbjct 2603 TTTTAGATGTAACTCCACTTTCTTTAGGAATTGAAACTTTAGGTAATGTCTTTACTAAAT 2662
Query 552358 TTATCGATAGAAATACTACTATTCCT---TGTAAAAAATCTCGTGTATTTTCTACGTATT 552414
| || || ||||||||||||||||| | ||||||| | || ||||| ||
Sbjct 2663 TAATTGAAAGAAATACTACTATTCCAACATCTAAAAAA---CAAGTCTTTTCAACTGCCG 2719
Query 552415 CAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAG 552474
|||| |||||| | || || ||||| |||| |||||||| | || | |
Sbjct 2720 CAGACAATCAACCAGCAGTAGATATTCATGTTTTACAAGGAGAACGTCCTTTAGCAGCTG 2779
Query 552475 ATAATAATCAACTT--GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGT 552532
||||||| ||||| || | || | ||| || |||||| || || ||||| ||| |
Sbjct 2780 ATAATAA--AACTTTGGGAAGATTCCAATTAACAGATATTCCACCAGCACCTCGCGGAAT 2837
Query 552533 ACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATT 552575
|| ||||||||||||||||| || | ||||| |||||||||
Sbjct 2838 TCCTCAAATTGAAGTTACTTTTGACCTGGATGCAAATGGAATT 2880
Score = 100 bits (110), Expect = 2e-15
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
|||||||| ||||| || || ||||||||||| | ||| | || ||||| ||||||||
Sbjct 1855 GCAGTAATTACTGTTCCTGCTTATTTTAATGATGCTCAAAGACAGGCTACCAAAGATGCA 1914
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| ||||| || | |||||| |||||||| || ||||| ||||| ||||| |||
Sbjct 1915 GGTAAAATTGCAGGCTTAAATGTTGAACGTATTATTAACGAACCAACTGCAGCTGCTCTT 1974
Query 550520 GCATATGGACTTGATAAA 550537
| ||||| |||| |||
Sbjct 1975 TCTTATGGTGTTGACAAA 1992
Score = 93.3 bits (102), Expect = 3e-13
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 361701 CAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTC 361760
||| |||||||| | | ||| || |||||||||||||| || |||||| | |
Sbjct 1987 CAACACCATAAGAAAGAGCAGCTGCAGTTGGTTCGTTAATAATACGTTCAACATTTAAGC 1928
Query 361761 CCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAA 361820
| || ||||| ||||||| || || || | ||| |||||||||||||| |||||||
Sbjct 1927 CTGCAATTTTACCTGCATCTTTGGTAGCCTGTCTTTGAGCATCATTAAAATAAGCAGGAA 1868
Query 361821 CAGTAATCACTGCTTT 361836
||||||| ||||| ||
Sbjct 1867 CAGTAATTACTGCCTT 1852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029277331767970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |