Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 2e-16
seq5 96.9 3e-15
>seq2
Length=4895233
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||||||| | || || |||||||| || || || ||||| || || || | ||
Sbjct 4675586 AGGCGCAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 4675527
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| ||||| || ||||| ||||| || || | ||| | |||||||
Sbjct 4675526 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCC 4675467
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || ||| | | | || || | ||||||||| | ||
Sbjct 4675466 TTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTG 4675407
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || ||||| | || || || || ||||||||
Sbjct 4675406 ATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 4675369
>seq5
Length=3440085
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || || || ||| || || || ||||| ||||| || | ||
Sbjct 3138272 AGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGG 3138213
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || ||||||||||| || || || || || ||||| || || | || | ||||||
Sbjct 3138212 CCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCC 3138153
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | || || | ||||||||||| ||
Sbjct 3138152 TTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGTGTT 3138093
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| ||||||||||| || || || || ||||||||
Sbjct 3138092 ATCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 3138055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380935961135019
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |