Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq109 154 1e-31
>seq109
Length=4663
Score = 154 bits (170), Expect = 1e-31
Identities = 192/259 (74%), Gaps = 8/259 (3%)
Strand=Plus/Plus
Query 474663 AACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACC-GCG--AGCTCATATCTTG 474719
|| ||||| | ||||| |||| || || ||||| ||| | || || | ||| | |
Sbjct 1780 AAGAAATTAGTGCAATGATTTTGGCAAATTTGAAAAAAAACTGCTGAAGAT--TATTTAG 1837
Query 474720 GACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTC 474779
|| |||||| | | ||||||||||||||||| || |||||||||||| ||||| | |
Sbjct 1838 GAGCCCAAGTAAGTAAGGCAGTAATTACTGTTCCTGCTTATTTTAATGATGCTCAAAGAC 1897
Query 474780 AAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAAC 474839
| || || |||||||| || | ||||||||| | |||||| |||||||||||| ||||
Sbjct 1898 AGGCTACCAAAGATGCAGGTAAAATTGCAGGCTTAAATGTTGAACGTATTATTAACGAAC 1957
Query 474840 CAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTT 474899
|||| ||||| || ||| |||||||| ||| | || |||||||||| | |||
Sbjct 1958 CAACTGCAGCTGCTCTTTCTTATGGTGTTG---ACAAAGGTGACAAAGAACAGACCATTT 2014
Query 474900 TAATCTTTGATTGTGGAGG 474918
|| | ||||| | |||||
Sbjct 2015 TAGTGTTTGACTTAGGAGG 2033
Score = 140 bits (154), Expect = 2e-27
Identities = 262/382 (69%), Gaps = 20/382 (5%)
Strand=Plus/Plus
Query 475781 AATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATT 475840
||| | ||| | ||||| ||||||| ||||| |||||||||| | |||| || |||
Sbjct 2515 AATAAGAGTATTAATCCCGATGAAGTAGTTGCTATTGGAGCTGCTATTCAAGGAGGAATT 2574
Query 475841 TTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTT 475900
||||||| ||||| ||| ||||| ||||| | || ||||||||||||
Sbjct 2575 CTATCAGG------AGACGTTAAAG------ATATTTTACTTTTAGATGTAACTCCACTT 2622
Query 475901 TCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCT 475960
|| ||||| ||||||| | || | | ||||| | ||||| ||||||||| ||
Sbjct 2623 TCTTTAGGAATTGAAACTTTAGGTAATGTCTTTACTAAATTAATTGAAAGAAATACTACT 2682
Query 475961 ATCCCATG--CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAA 476018
|| ||| | ||||| ||| || ||||| ||| | || |||||| || | |||
Sbjct 2683 ATTCCAACATCTAAAAAACAA--GTCTTTTCAACTGCCGCAGACAATCAACCAGCAGTAG 2740
Query 476019 CCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTT--GGAAC 476076
|| || | || |||| ||| | || | |||||||| ||||| ||||
Sbjct 2741 ATATTCATGTTTTACAAGGAGAACGTCCTTTAGCAGCTGATAATAA--AACTTTGGGAAG 2798
Query 476077 TTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTT 476136
|| | | || |||||| || || || | ||| ||||||||||||||||||||||
Sbjct 2799 ATTCCAATTAACAGATATTCCACCAGCACCTCGCGGAATTCCTCAAATTGAAGTTACTTT 2858
Query 476137 TGATATTGATGCAAATGGTATT 476158
||| | ||||||||||| |||
Sbjct 2859 TGACCTGGATGCAAATGGAATT 2880
Score = 89.7 bits (98), Expect = 3e-12
Identities = 128/180 (71%), Gaps = 8/180 (4%)
Strand=Plus/Minus
Query 290823 CAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGAC 290882
||| |||||| | | | |||||| |||||||| || ||||| | | |||| | |
Sbjct 1987 CAACACCATAAGAAAGAGCAGCTGCAGTTGGTTCGTTAATAATACGTTCAACATTTAAGC 1928
Query 290883 CTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGA 290942
|||||||||| | | |||| || ||||| | ||| |||||||||||||||||||| |
Sbjct 1927 CTGCAATTTTACCTGCATCTTTGGTAGCCTGTCTTTGAGCATCATTAAAATAAGCAGGAA 1868
Query 290943 CTGTAATAACAGCTTTTTCCACTTTCTT----TTTCAAATAATTTTCTGCCATTTGTTTT 290998
| ||||| || || || |||| ||| | ||||||| ||| || ||| ||||
Sbjct 1867 CAGTAATTACTGCCTT----ACTTACTTGGGCTCCTAAATAATCTTCAGCAGTTTTTTTT 1812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268164058117244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |