Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 291 1e-73 seq1 96.9 4e-15 >seq3 Length=3828249 Score = 291 bits (322), Expect = 1e-73 Identities = 1159/1804 (64%), Gaps = 49/1804 (3%) Strand=Plus/Minus Query 75187 GCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCAT 75246 ||||||||||| || | ||| |||||| ||||| ||||||| || || | || || Sbjct 3342679 GCTCGATGGCAAAGTCGTCGAACGGCCACAGCACATGATCATGCGTGTTGCTGTTGGTAT 3342620 Query 75247 CCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTT 75306 | || || || || || || | ||||| ||| || |||||| || | || Sbjct 3342619 CTGGGGAGATGATATCGAGAGAGTGATTGAGACTTACAACCTGATGTCGCACAAATTTTT 3342560 Query 75307 CATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTG 75366 || |||||| | || || || ||||| ||||||||||| || ||| |||| || Sbjct 3342559 CACACACGCATCGCCTACGCTGTTCAACGCTGGTACACCCCAGCCTCAGCTGTCGTCATG 3342500 Query 75367 CTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTG 75426 |||||| ||| || ||||| ||| || | |||||||| | ||||| | | || Sbjct 3342499 CTTCCTCGTCGACATGAAGGATGACAGCATTGAGGGTATCTACGATACTCTCAAGACATG 3342440 Query 75427 TGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAA 75486 || ||||| ||| ||| || |||||||| || || ||||| | | | |||| Sbjct 3342439 CGCCATGATCTCCAAGATGGCCGGAGGTATTGGTCTGAACGTCCATCGTATCCGCGCCAC 3342380 Query 75487 TAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGT 75546 | ||| ||| || || || || ||| ||||||| ||||| |||||||| || Sbjct 3342379 TGGCTCTTATATAGCCGGTACCAACGGCACGTCAAATGGTATCATTCCCATGCTTCGTGT 3342320 Query 75547 ATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCCAT 75600 || ||| ||| || || || || | || ||| || |||| || | | Sbjct 3342319 CTTCAACAACACTGCCCGTTACGTTGACCA---GGGTGGTAACAAGCGTCCTGGTGCTTT 3342263 Query 75601 CGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAA 75660 ||| ||||| |||| |||||||| || ||| || | |||||||| || || ||| || Sbjct 3342262 CGCTATCTACCTGGAGCCATGGCACGCTGATGTCTTTGAGTTCCTCGATTTGCGAAAGAA 3342203 Query 75661 CCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCT 75720 ||| ||| | || |||| ||| | || ||||| |||| |||||||| ||||| Sbjct 3342202 CCACGGTAAGGAGGAGGTCCGGGCCCGCGACCTCTTCCTTGCCCTCTGGATTCCTGACCT 3342143 Query 75721 TTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACC 75780 |||||||||||||||||| || || | ||| | || | || || || || || Sbjct 3342142 CTTCATGAAGCGGGTTGAGAAGAACGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCC 3342083 Query 75781 AGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGG 75839 || || | || ||||| ||||| || || || ||| ||||| || |||| Sbjct 3342082 CGGCCTTGCTGAATGCTACGGTGACGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGA 3342023 Query 75840 AGG--GTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAAT 75896 ||| | | ||| ||| | || | | || | | ||| | || || ||| | Sbjct 3342022 AGGCCGCGGCCGCAA---GACCAT-GAAGGCTCAGAAGCTGTGGTACGCCATCCTCGAGG 3341967 Query 75897 CACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTA 75956 | ||||| ||||| || | || | ||||| ||||||||||| || ||| ||||| | Sbjct 3341966 CCCAGACCGAGACCGGCAACCCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCA 3341907 Query 75957 ACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACA 76016 |||| ||||| ||||||| ||| ||||| || || ||||| || || | |||||| Sbjct 3341906 ACCAGAAGAACCTGGGAACCATCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACT 3341847 Query 76017 CAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT-- 76074 | | |||||| |||||| ||||| |||| || || || || ||| ||||| Sbjct 3341846 GTGCTCCTGATGAGGTGGCTGTCTGCAACCTGGCCTCCATTGCTCTGCCAGCATATGTTG 3341787 Query 76075 -CAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAG---ATTG 76130 | | ||| | | || | | | | | || || || |||| || ||| Sbjct 3341786 ACTACGAAAACAACTGC---TACAACTTCCAGCATCTCCACGAGGTCACCCAGGTCGTTG 3341730 Query 76131 TTACCAAAAATCTAAACCGAG-TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGA 76189 || ||| || | | || ||||||| || || ||||| || || Sbjct 3341729 TTCGCAA----CTTGAACAAGATCATTGATGTCAACCACTACCCCGTGAAGGAGGCATAC 3341674 Query 76190 AAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTT 76249 || || ||||||||||| || |||||| | ||||| || ||||| || |||| || Sbjct 3341673 AACAGCAACATGCGACACAGGCCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCCTTC 3341614 Query 76250 ATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTT 76309 | |||| | ||||| || ||| || || |||| | ||||| Sbjct 3341613 TTGGCTCTCCGCATGCCTTTTGAGTCCCCTGAGGCTCGCCAGCTGAACAAACAGATCTTC 3341554 Query 76310 GAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCC 76369 || ||||| || || || | || ||| ||| || | || | | | || | Sbjct 3341553 GAGACCATCTACCATGCTGCTTTGACTGCGTCTTGCGACATCGCCAAGGTTGACGGCCCA 3341494 Query 76370 TATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAA 76429 || |||||| ||||| ||||||| || || || |||||| | ||| ||||||| Sbjct 3341493 TACCAGACATACGAGGGATCTCCCGTCTCGCAGGGACAGCTTCAATATGACATGTGGG-G 3341435 Query 76430 GGTGAAACC--AAGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGG 76487 || | || | || || |||||||||| | | |||| | ||||||||| | | Sbjct 3341434 CGTCCAGCCTTCTGATC-TCTGGGACTGGGATGCTTTGAAGGCAAAGATCAAGGAGCACG 3341376 Query 76488 GTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGG 76547 || | || ||||| | ||||||||||| ||||| || || ||||| | || || ||| Sbjct 3341375 GTATCCGAAACAGCTTGTTGATGGCACCCATGCCTACCGCATCCACATCGCAGATTCTGG 3341316 Query 76548 GTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAG 76607 | || || || ||||| || |||||||| | |||||||||| | || | || || | Sbjct 3341315 GCAACAACGAGTGCTTCGAGCCATACACCTCTAACATCTACCAGCGACGTGTGCTTGCTG 3341256 Query 76608 GTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGT 76667 | ||||| | |||||| || ||| ||||| | |||||||||| |||| Sbjct 3341255 GCGAGTTCCAGGTCGTCAACCCCTGGCTACTCAGGGACCTGACAGAGATTGGTCTGTGGT 3341196 Query 76668 CCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATA 76727 | ||| ||||||| | | || | | | |||||| || || || ||| | | Sbjct 3341195 CTGAGGCTATGAAGAACCGTATTATTGCCGAAGATGGTTCTATCCAGAACATCCCCAGCA 3341136 Query 76728 TCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTC- 76786 |||| | ||||||||| | | ||| || || |||||| || | ||| | | Sbjct 3341135 TCCCGGCCGATATCAAGGCTTTGTACAAGACCGTCTGGGAAGTC----TCCCAGAGGACG 3341080 Query 76787 ATTG---ACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAG--TATGAATC 76841 |||| | ||| | || || |||||| |||||| || | |||| || | | || Sbjct 3341079 ATTGTGCAGATGTCTGCTGACCGTGGTGCCTTCATCGACC--AGTCGCAGTCTCTCAACA 3341022 Query 76842 TATTCATG-GAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAA 76900 | |||| | || || || ||| |||| || || ||||| | || ||||| Sbjct 3341021 TCCACATGCGTGAG-CCCACTATGGGCAAGATCACTAGCATGCACTTCACCGGCTGGAAG 3340963 Query 76901 CAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAG 76960 | ||| |||||||| || |||||||| ||||| | ||||| || || |||||| Sbjct 3340962 CTGGGTCTCAAAACTGGCATGTACTACCTCCGCACTCAGGCGGCGGCAGCGCCCATTCAG 3340903 Query 76961 TTCA 76964 |||| Sbjct 3340902 TTCA 3340899 >seq1 Length=5395810 Score = 96.9 bits (106), Expect = 4e-15 Identities = 293/453 (65%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 ||| |||| |||| || |||| || || ||| ||||||||||||||| ||| | | Sbjct 863716 CCTACGCCCAGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTT 863657 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | | || | ||| |||||||||| ||||| ||||| ||||| |||||| || | Sbjct 863656 TCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCTGGCCTGACCTTCTCCAACG 863597 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248 | || || || || || |||||||| ||| || || ||| ||| ||| Sbjct 863596 AGCTGATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCTGTTCTCTCACC 863537 Query 65249 TGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTG 65308 || | || | |||| | | || | ||| | | || || || | |||| Sbjct 863536 TGAGGAACCGCCCCAGCAAGGCGCGCGTCGAGAAGATCATCACTGATGCCGTCGCCATTG 863477 Query 65309 AGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGA 65368 |||| | |||| | || || || || || | ||| |||| |||||| | | || Sbjct 863476 AGAAGGAGTTCCTGACTGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCAACCTGA 863417 Query 65369 TGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA 65428 || ||||||| |||| ||| | || ||||||||| |||| || | | Sbjct 863416 TGAAGCAGTACATCGAGTTCGTGGCCGACCGTCTCCTCGTCGCCCTTGG-----CAACGA 863362 Query 65429 -----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAA 65483 | | || | | || || || ||||| ||||| ||||| ||||| || || Sbjct 863361 GAAGGTCTACAAGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAA 863302 Query 65484 GACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 |||||||||||| |||||||| || || ||||| Sbjct 863301 GACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 863269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566967636640