Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq3 168 2e-36
seq71 111 5e-19
seq12 107 6e-18
seq6 105 2e-17
>seq3
Length=3828249
Score = 168 bits (186), Expect = 2e-36
Identities = 474/723 (66%), Gaps = 11/723 (2%)
Strand=Plus/Plus
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
||||| ||||||||| || || |||||| || | ||||||||||| || | |
Sbjct 3341858 ATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGG 3341917
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|| || ||||||||||| || ||| | ||| | || ||||| |||| || || || ||
Sbjct 3341918 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATG 3341977
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819
||| || | | || || || |||| | | |||||| ||| || |||
Sbjct 3341978 GCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTC 3342037
Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879
||||| | | | || |||||||| || ||| || || ||||||| | ||||
Sbjct 3342038 TCGTACAGAGCCTCGAACTCGTCACCGTAGCATTCAGCAAGGCCGGGGCACTCGTTGGGG 3342097
Query 155880 CAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCATAAATACATCACTCGCC 155936
|| | || | ||| || || | | | |||| ||| || | ||| |
Sbjct 3342098 CACATGAGGGTCCAGTCGCCGTTCTTCTCAA---CCCGCTTCATGAAGAGGTCAGGAATC 3342154
Query 155937 CAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGC 155996
|| | ||| ||| ||||| | ||| |||||| | ||||| ||||| || |
Sbjct 3342155 CAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAA 3342214
Query 155997 TCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTC 156056
|| | ||| || | ||||| || ||||||||| || ||||| ||| ||||
Sbjct 3342215 TCGAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGA 3342274
Query 156057 CTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGA 156113
| |||| |||||||| || || || || ||||| || |||||||||| ||||| |||
Sbjct 3342275 CGCTTGTTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGA 3342334
Query 156114 ATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTA 156173
|| |||||||| || ||||| ||||| ||| |||| || |||| | ||| | | |
Sbjct 3342335 ATGATACCATTTGACGTGCCGTTGGTACCGGCTATATAAGAGCCAGTGGCGCGGATACGA 3342394
Query 156174 TGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAGT 156232
|| | | || |||||||| || | |||| || || || |||||| ||| | |||
Sbjct 3342395 TGGACGTTCAGACCAATACCTCCGG-CCATCTTGGAGATCATGGCGCATGTCTTGAGAGT 3342453
Query 156233 ATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTG 156292
|| | | ||||| ||||| ||||| | ||| | || |||| || | ||
Sbjct 3342454 ATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCATGACGACAGCTG 3342513
Query 156293 AGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGA 156352
||| | ||||| ||||||||||| || ||||| | ||| || | ||| | || | ||
Sbjct 3342514 AGGCTGGGGTGTACCAGCGTTGAACAGCGTAGGCGATGCGTGTGTGAAAAATTTGTGCGA 3342573
Query 156353 CAT 156355
|||
Sbjct 3342574 CAT 3342576
>seq71
Length=8934
Score = 111 bits (122), Expect = 5e-19
Identities = 231/339 (68%), Gaps = 10/339 (3%)
Strand=Plus/Plus
Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080
|||||| || |||| || |||||||| || || |||| | ||| |||| ||
Sbjct 5237 CTTTTTCTAGCAACTGCCTCAATTTCATCGATAAAAACGATACAAGGAGCTGCCAGTTGA 5296
Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140
|| | ||| | ||||| ||||| || ||||||| ||| ||||| | ||| | ||
Sbjct 5297 GCTTCTTTAAAAAGATCTCTAACACGCGAAGCTCCAACACCTACATAAACTTCATCGAAA 5356
Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200
|||||| | || | || || | || ||| || ||||| ||||| | || ||
Sbjct 5357 TCAGAACCCGAAGCAGCAAAAAAAGGAACGCCTGCCTCACCTGCAACTGCTTTGGCAAGT 5416
Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC- 289259
| || || |||||||| || ||||| | || | |||||| || || | | |||| ||
Sbjct 5417 AAGGTTTTTCCTGTTCCGGGAGGTCCGTACAACAAAACTCCTTTAGGAATTCTTGCTCCC 5476
Query 289260 --AGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTA-CAATTTCCTCA-AGTTCAT 289315
||||| |||||| ||| | |||||||| || | ||||| || | | ||| |
Sbjct 5477 ATAGCAGC---ATATTTACGCGGGTTTTTTAAAAAGTCAATCAATT--CTGACATTTCTT 5531
Query 289316 ATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGTAA 289354
|||| | |||||| |||||||||||| | ||||||||
Sbjct 5532 CTTTTTCTTCATCAGCTCCTGCTACATCTGAAAAAGTAA 5570
>seq12
Length=1424102
Score = 107 bits (118), Expect = 6e-18
Identities = 127/171 (74%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 251402 AGGCG--ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATA 251459
||||| || || ||||| | | ||| | ||||| ||| | ||||| || | ||| |
Sbjct 98418 AGGCGTCATGAGCCCACAAATCTCACAAATGTGGACTCTGAACGCATCCGAGACTTCAAA 98477
Query 251460 TAGCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTC 251519
|| || |||| ||| | |||||||| | ||||||||||||||||||||||||
Sbjct 98478 CAGGCGCTCCTTTAGGAACGCCGCCGCACCGTGAGCAATCATACAATCACGCTCCATTTC 98537
Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570
||||||||||||||||| || || || | ||||||| | ||||| || ||
Sbjct 98538 TCCGAAACGAAGACCACCGTCTCGCGCACGACCCTCGACCGGCTGCCGCGT 98588
Score = 86.0 bits (94), Expect = 2e-11
Identities = 112/152 (74%), Gaps = 6/152 (4%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| ||||| |||||||| ||||| || ||||| ||||||||||| ||||| | |
Sbjct 98857 TGAGCGATTGTCATACGCGATGGAATGGCGTGGGGGTTGATGATGATATCGGGCGTGACA 98916
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTT 251955
|| || |||||| ||||| || ||||| | ||| || |||||||| |||||
Sbjct 98917 CCCTCGCGAGTGAACGGCATGTC---TTCCTGACGGTAAGTGACACCAATAGTGCCCTTC 98973
Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
|| || |||||||| |||||| ||||||||
Sbjct 98974 TGACCATGACGAGATGCGAACTTGTCACCAAT 99005
>seq6
Length=3351076
Score = 105 bits (116), Expect = 2e-17
Identities = 174/251 (69%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652
|| |||||||| ||||| ||| || || || || || |||||||| | ||| | |||
Sbjct 799565 CGGCGCTGAATGTAACCTGTTTCAGCGGTCTTGACTGCGGTATCAATCAAACCTTCTCGA 799624
Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712
||| |||| || |||||||| | || ||| || || | | | ||| | ||
Sbjct 799625 CCAGCCATGGCGTGGAAGAAGAATTCGGTGGGTGTCAGACCACGGAGGTAAGAGTTTTCG 799684
Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772
||||| ||||| || || || || | || |||||| ||||| ||||| || | || |
Sbjct 799685 ACGAATCCACGAGCTTCCGGTGAGTAATCATCCTTGGTGAAGTGAGGCAGAGTTCGGTAC 799744
Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATC 302832
| ||||| | |||||||||||||| ||||| ||| || |||| || |||||
Sbjct 799745 TTGAAGCCGAAGGGGATACGCTTTCCCTCAACAACCTGTTGGCCCACTAGCGCGGTCATC 799804
Query 302833 TGCGAAATATT 302843
||||| || ||
Sbjct 799805 TGCGAGATGTT 799815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471810943244961
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |