Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3 168 2e-36 seq71 111 5e-19 seq12 107 6e-18 seq6 105 2e-17 >seq3 Length=3828249 Score = 168 bits (186), Expect = 2e-36 Identities = 474/723 (66%), Gaps = 11/723 (2%) Strand=Plus/Plus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 ||||| ||||||||| || || |||||| || | ||||||||||| || | | Sbjct 3341858 ATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGG 3341917 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || ||||||||||| || ||| | ||| | || ||||| |||| || || || || Sbjct 3341918 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATG 3341977 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| || | | || || || |||| | | |||||| ||| || ||| Sbjct 3341978 GCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTC 3342037 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 ||||| | | | || |||||||| || ||| || || ||||||| | |||| Sbjct 3342038 TCGTACAGAGCCTCGAACTCGTCACCGTAGCATTCAGCAAGGCCGGGGCACTCGTTGGGG 3342097 Query 155880 CAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCATAAATACATCACTCGCC 155936 || | || | ||| || || | | | |||| ||| || | ||| | Sbjct 3342098 CACATGAGGGTCCAGTCGCCGTTCTTCTCAA---CCCGCTTCATGAAGAGGTCAGGAATC 3342154 Query 155937 CAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGC 155996 || | ||| ||| ||||| | ||| |||||| | ||||| ||||| || | Sbjct 3342155 CAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAA 3342214 Query 155997 TCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTC 156056 || | ||| || | ||||| || ||||||||| || ||||| ||| |||| Sbjct 3342215 TCGAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGA 3342274 Query 156057 CTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGA 156113 | |||| |||||||| || || || || ||||| || |||||||||| ||||| ||| Sbjct 3342275 CGCTTGTTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGA 3342334 Query 156114 ATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTA 156173 || |||||||| || ||||| ||||| ||| |||| || |||| | ||| | | | Sbjct 3342335 ATGATACCATTTGACGTGCCGTTGGTACCGGCTATATAAGAGCCAGTGGCGCGGATACGA 3342394 Query 156174 TGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAGT 156232 || | | || |||||||| || | |||| || || || |||||| ||| | ||| Sbjct 3342395 TGGACGTTCAGACCAATACCTCCGG-CCATCTTGGAGATCATGGCGCATGTCTTGAGAGT 3342453 Query 156233 ATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTG 156292 || | | ||||| ||||| ||||| | ||| | || |||| || | || Sbjct 3342454 ATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCATGACGACAGCTG 3342513 Query 156293 AGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGA 156352 ||| | ||||| ||||||||||| || ||||| | ||| || | ||| | || | || Sbjct 3342514 AGGCTGGGGTGTACCAGCGTTGAACAGCGTAGGCGATGCGTGTGTGAAAAATTTGTGCGA 3342573 Query 156353 CAT 156355 ||| Sbjct 3342574 CAT 3342576 >seq71 Length=8934 Score = 111 bits (122), Expect = 5e-19 Identities = 231/339 (68%), Gaps = 10/339 (3%) Strand=Plus/Plus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 |||||| || |||| || |||||||| || || |||| | ||| |||| || Sbjct 5237 CTTTTTCTAGCAACTGCCTCAATTTCATCGATAAAAACGATACAAGGAGCTGCCAGTTGA 5296 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || | ||| | ||||| ||||| || ||||||| ||| ||||| | ||| | || Sbjct 5297 GCTTCTTTAAAAAGATCTCTAACACGCGAAGCTCCAACACCTACATAAACTTCATCGAAA 5356 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 |||||| | || | || || | || ||| || ||||| ||||| | || || Sbjct 5357 TCAGAACCCGAAGCAGCAAAAAAAGGAACGCCTGCCTCACCTGCAACTGCTTTGGCAAGT 5416 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC- 289259 | || || |||||||| || ||||| | || | |||||| || || | | |||| || Sbjct 5417 AAGGTTTTTCCTGTTCCGGGAGGTCCGTACAACAAAACTCCTTTAGGAATTCTTGCTCCC 5476 Query 289260 --AGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTA-CAATTTCCTCA-AGTTCAT 289315 ||||| |||||| ||| | |||||||| || | ||||| || | | ||| | Sbjct 5477 ATAGCAGC---ATATTTACGCGGGTTTTTTAAAAAGTCAATCAATT--CTGACATTTCTT 5531 Query 289316 ATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGTAA 289354 |||| | |||||| |||||||||||| | |||||||| Sbjct 5532 CTTTTTCTTCATCAGCTCCTGCTACATCTGAAAAAGTAA 5570 >seq12 Length=1424102 Score = 107 bits (118), Expect = 6e-18 Identities = 127/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 251402 AGGCG--ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATA 251459 ||||| || || ||||| | | ||| | ||||| ||| | ||||| || | ||| | Sbjct 98418 AGGCGTCATGAGCCCACAAATCTCACAAATGTGGACTCTGAACGCATCCGAGACTTCAAA 98477 Query 251460 TAGCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTC 251519 || || |||| ||| | |||||||| | |||||||||||||||||||||||| Sbjct 98478 CAGGCGCTCCTTTAGGAACGCCGCCGCACCGTGAGCAATCATACAATCACGCTCCATTTC 98537 Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 ||||||||||||||||| || || || | ||||||| | ||||| || || Sbjct 98538 TCCGAAACGAAGACCACCGTCTCGCGCACGACCCTCGACCGGCTGCCGCGT 98588 Score = 86.0 bits (94), Expect = 2e-11 Identities = 112/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || ||||| |||||||| ||||| || ||||| ||||||||||| ||||| | | Sbjct 98857 TGAGCGATTGTCATACGCGATGGAATGGCGTGGGGGTTGATGATGATATCGGGCGTGACA 98916 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTT 251955 || || |||||| ||||| || ||||| | ||| || |||||||| ||||| Sbjct 98917 CCCTCGCGAGTGAACGGCATGTC---TTCCTGACGGTAAGTGACACCAATAGTGCCCTTC 98973 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || || |||||||| |||||| |||||||| Sbjct 98974 TGACCATGACGAGATGCGAACTTGTCACCAAT 99005 >seq6 Length=3351076 Score = 105 bits (116), Expect = 2e-17 Identities = 174/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652 || |||||||| ||||| ||| || || || || || |||||||| | ||| | ||| Sbjct 799565 CGGCGCTGAATGTAACCTGTTTCAGCGGTCTTGACTGCGGTATCAATCAAACCTTCTCGA 799624 Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712 ||| |||| || |||||||| | || ||| || || | | | ||| | || Sbjct 799625 CCAGCCATGGCGTGGAAGAAGAATTCGGTGGGTGTCAGACCACGGAGGTAAGAGTTTTCG 799684 Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772 ||||| ||||| || || || || | || |||||| ||||| ||||| || | || | Sbjct 799685 ACGAATCCACGAGCTTCCGGTGAGTAATCATCCTTGGTGAAGTGAGGCAGAGTTCGGTAC 799744 Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATC 302832 | ||||| | |||||||||||||| ||||| ||| || |||| || ||||| Sbjct 799745 TTGAAGCCGAAGGGGATACGCTTTCCCTCAACAACCTGTTGGCCCACTAGCGCGGTCATC 799804 Query 302833 TGCGAAATATT 302843 ||||| || || Sbjct 799805 TGCGAGATGTT 799815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810943244961