Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3 178 2e-38
seq7 167 3e-35
seq1 125 9e-23
seq10 111 2e-18
seq2 107 2e-17
seq5 93.3 5e-13
>seq3
Length=3828249
Score = 178 bits (196), Expect = 2e-38
Identities = 260/368 (71%), Gaps = 6/368 (2%)
Strand=Plus/Plus
Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180
||||||||||| |||||||| || || ||||| | ||| |||| ||||||||||||
Sbjct 2026828 GTCGGCTGCATAGTCGACGGCTGCCCACCCGGCATGGCCCTGACCGAAGCCGACATCCAG 2026887
Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240
|| ||| || | ||||| || |||||| ||| | |||| || |||||||||
Sbjct 2026888 CCCCAGATGACGAGACGCCGGCCCGGCCAGTCCGCCATCACCACCCCTCGCAACGAGAAA 2026947
Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGC 18300
|| ||||| ||||| || ||||| ||| |||| | ||||| ||| | || | |||
Sbjct 2026948 GACCGCGTGCAGATCCAATCCGGCACCGAGTTCGGCGTGACGCTGGGCACACCAATTGGC 2027007
Query 18301 CTCTTTGTGGCCAACCGCGACCAGCGGCC------CGTCGACTATTCCGACATGTGCAAG 18354
| | || ||| ||||||||||| | || | | || |||| || |
Sbjct 2027008 ATGCTGGTCATGAACGAGGACCAGCGGCCAAAGGACTACGGCAACTCGACCATGGACATG 2027067
Query 18355 GTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCG 18414
| || || ||||| |||||||||| |||||| ||| ||||||||| ||||||| |||
Sbjct 2027068 TTCCCCCGCCCCTCGCACGCCGACTGGACCTACCTGGAGAAGTACGGCGTCAAGGCCTCG 2027127
Query 18415 TCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTC 18474
|| ||||| ||| || || || |||||| || ||| || ||||||||||| ||
Sbjct 2027128 TCCGGCGGCGGCAGGAGCAGCGCGCGGGAGACCATCGGGCGGGTGGCCGCCGGCGCCATC 2027187
Query 18475 GCCGAGAA 18482
||||||||
Sbjct 2027188 GCCGAGAA 2027195
Score = 141 bits (156), Expect = 1e-27
Identities = 127/158 (80%), Gaps = 1/158 (1%)
Strand=Plus/Plus
Query 19046 GGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGA 19105
||||||||||||||| || || || ||||| |||| ||| | ||||| |||||
Sbjct 2027430 GGACAGCATCGGCGGGACCGTCACCTGCGTCATCAAGAACGCGCCCTCGGGCCTGGGCGA 2027489
Query 19106 GCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCAC 19165
||||||||| |||||||| |||||| |||||| |||||||||||||| ||||| |||||
Sbjct 2027490 GCCGTGCTTCGACAAGATGGAGGCCATGCTCGCGCACGCCATGCTGTCCATCCCCGCCAC 2027549
Query 19166 CAAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
|||||| |||||||| ||| ||| || |||| ||||
Sbjct 2027550 CAAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 2027587
Score = 125 bits (138), Expect = 9e-23
Identities = 269/408 (66%), Gaps = 2/408 (0%)
Strand=Plus/Plus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220
||| || |||||||||||||||||||| | || | || |||||||||| |||||||
Sbjct 3341850 ACTCGATGATCTCGGTGCACAGGTTGGAGCTGCG-GATGGTTCCCAGGTTCTTCTGGTTG 3341908
Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280
| | ||||| ||| ||||||| ||||||| |||| |||||||||| |||| |||
Sbjct 3341909 CTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCC 3341968
Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340
||| |||||| |||| | || | || || | | || ||||||| |
Sbjct 3341969 TCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTC 3342028
Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400
|| || | | |||||||| || |||||||| |
Sbjct 3342029 TCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCATTCAGCAAGGCCGGGGCAC 3342088
Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCA 1628460
||| || || | ||| | ||||||||| || | | || ||| |||||||||
Sbjct 3342089 TCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCA 3342148
Query 1628461 CACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 1628520
|||| || || ||||||||||| |||||| ||||||||| ||||||||||||
Sbjct 3342149 GGAATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGTTCTTT 3342208
Query 1628521 TTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568
| ||||| | || | | || |||||||| ||||||||||||
Sbjct 3342209 CGCAAATCGAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAG 3342256
>seq7
Length=2986693
Score = 167 bits (184), Expect = 3e-35
Identities = 272/387 (70%), Gaps = 6/387 (2%)
Strand=Plus/Minus
Query 1573866 GACGGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGC 1573925
|||||| |||||||| || || | | | || |||||||| |||||||| || |||
Sbjct 2054747 GACGGCAACATGCCCCACGTCATCATCTCAGGCATGCCCGGCATCGGCAAGACGACCAGC 2054688
Query 1573926 ATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 1573985
| || || ||||| ||| |||||| || | | |||||||| || || |||
Sbjct 2054687 GTGCTCTGCCTCGCGCGACAGCTCCTGGGCGACGCATACAAGGAGGCCGTACTGGAGCTC 2054628
Query 1573986 AACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCC 1574045
||||| ||||||||||||||| | ||||| ||||| || ||||||| | ||||
Sbjct 2054627 AACGCCTCGGACGAGCGCGGCATAGACGTGGTGCGGAACCGCATCAAGGGCTTCGCCCAG 2054568
Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105
|||| | || ||||| ||||| || |||||||| |||||||||||||||| ||| ||
Sbjct 2054567 AAGAAGGTCACGCTGCCTCCCGGGCGGCACAAGGTTGTCATCCTCGACGAGGCGGACAGC 2054508
Query 1574106 CTCACG-TCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGAC 1574164
| ||| |||| || ||||||||| || || || ||||| | || | || || ||
Sbjct 2054507 ATGACGAGCGGC-GCGCAGCAGGCCTTGAGGCGGACTATGGAGATCTACTCGAATACTAC 2054449
Query 1574165 GCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGC-- 1574222
| || || | ||||||||| ||| | | |||||||| | || | ||||||
Sbjct 2054448 TAGGTTCGCATTTGCGTGCAACCAGTCCAACAAGATCATCGAGCCGCTGC--AGTCGCGA 2054391
Query 1574223 TGCGCCATTCTGCGCTTTGTGCGCCTG 1574249
|| || || ||||| | || | | |||
Sbjct 2054390 TGTGCGATCCTGCGGTATGCGAGGCTG 2054364
>seq1
Length=5395810
Score = 125 bits (138), Expect = 9e-23
Identities = 104/127 (82%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
|| || ||| | || || || ||||||||| | ||||||||| | || || ||| | ||
Sbjct 3993561 CTGTTCGAGATCATTCTTGCTGCCAACTACATGGACATCAAGGCGCTTCTGGATGTCGGC 3993620
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
|||||| | || ||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 3993621 TGCAAGACAGTTGCCAACATGATCAAGGGCAAGTCTCCCGAGGAGATTCGCAAGACTTTC 3993680
Query 1592288 AACATCA 1592294
|||||||
Sbjct 3993681 AACATCA 3993687
Score = 123 bits (136), Expect = 3e-22
Identities = 176/245 (72%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 863260 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATG 863319
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | ||||||| ||| ||| || || | ||
Sbjct 863320 TTCTCCATGAAGTCGAAGGGGTTGGTGGACTTGTAGACCTTCTCGTTGCCAAGGGCGACG 863379
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| || |||||||| || |||||||||||||| ||| ||| ||||||||||||||
Sbjct 863380 AGGAGACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGC 863439
Query 868871 AG-CGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929
|| | || || || | ||| ||| ||||| ||||| || ||||||| || |||
Sbjct 863440 AGACTGCA-GGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGGCGACGGCATCAGTGAT 863498
Query 868930 GATCT 868934
|||||
Sbjct 863499 GATCT 863503
Score = 107 bits (118), Expect = 2e-17
Identities = 141/195 (72%), Gaps = 9/195 (5%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||||| |||||| |||| ||||| ||||| || ||||||||
Sbjct 863574 ACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGACCGCGCTT 863633
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||| ||||| ||||||| | |||| || ||| ||||| ||||| || || || ||
Sbjct 863634 CTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCTCAACAGCAGCGAA 863693
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTG---TCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355
| | | || |||| ||| ||||| ||| || || |||||||||||| ||
Sbjct 863694 GGCAACCAGACGCTGGGCGTAGGTGGACTCGTGGTCC------GTGATCCACTTCAGGGC 863747
Query 869356 CCAGTCGGCCTTTTT 869370
|||||||||||| ||
Sbjct 863748 CCAGTCGGCCTTCTT 863762
>seq10
Length=1984115
Score = 111 bits (122), Expect = 2e-18
Identities = 195/280 (70%), Gaps = 7/280 (3%)
Strand=Plus/Minus
Query 1852040 AGGCCGATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGCTCTCGGTGAGGCCCGGC 1852099
||| ||||||||||| ||| ||||| | ||||||||||| || ||||| ||
Sbjct 928883 AGGTCGATCTTGGAGTTGGCGTCGCTCGACGACATCTTGCCGCCCTGC---AGGCCGGGG 928827
Query 1852100 ACGAGCGGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGC 1852159
|| | ||||| | | ||| ||||| || || || || ||||| |||
Sbjct 928826 ACCATGGGGTTCATGATGTGCGCGCGCTGGCGGTACCCCAGCTTGGGCAGCCAGTCCTTG 928767
Query 1852160 GCAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 1852219
|| | || | ||||||||||||| ||||| ||||| |||| ||| |||||| |
Sbjct 928766 GCGGCCGTGAAGAGCTTGCGCTGGTCGACGCCGCCGAACTGCACGTCCACGCCGAGGTAC 928707
Query 1852220 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTT-GCGGTC 1852278
||||||||||| |||||| || |||||||||| | | |||| ||| ||| || ||
Sbjct 928706 TGCTCGTCGAGCACCTGCAGGACGGGGTAGAGCAGGCCGGACAGGGGCGCGTTGGCCGT- 928648
Query 1852279 CATCTTGACCACCTGAGCGGCGGCCT--TTTGCGCCGTGC 1852316
| |||||| |||| ||| |||||| || ||| |||||
Sbjct 928647 CTGCTTGACGACCTCGGCGCCGGCCTTCTTGGCGTCGTGC 928608
>seq2
Length=4895233
Score = 107 bits (118), Expect = 2e-17
Identities = 98/121 (81%), Gaps = 2/121 (2%)
Strand=Plus/Minus
Query 344182 GTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGA-CGAGGC 344240
|| ||||||||||| || |||||||||||||||||||| ||||||||| || | || ||
Sbjct 2845747 GTCGCCTTCCCCACAGAAACCGTCTACGGCCTCGGCGCGGACGCCACG-CTCACCGCCGC 2845689
Query 344241 CGTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGT 344300
||| | |||||| | | ||||||||| ||||| |||||||| |||| ||||||||
Sbjct 2845688 CGTCAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCGGACAACCCGCTCATCGTGCACGT 2845629
Query 344301 G 344301
|
Sbjct 2845628 G 2845628
Score = 87.8 bits (96), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 1572380 CCGGTCGAGCCAAAGCCGCCGCTGCCGCGCTCGGTGTCGTCCAGCGAGTCGACCCACTCG 1572439
|| || ||||| ||||||||| ||||||| || | || |||||| || | |
Sbjct 618134 CCCGTGGAGCCGAAGCCGCCGGCGCCGCGCACGCTCTCCTCCAGCTCCGTGATCTCCATC 618193
Query 1572440 GGCTCGGGTTGGGCAATCTTTTCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACA 1572499
|||||| | || |||| || | |||||||| ||| ||||||| | |
Sbjct 618194 ACCTCGGGGGTGTAGATGCGCTCGAGGACGAGCTGGGCGACGCGG---TCGCCCTCGGCC 618250
Query 1572500 ACGTGG---TCGGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCG 1572556
|| ||| |||||||| | ||||||||| || | ||| |||| |||||| ||||||
Sbjct 618251 ACCTGGAAGTCGGCGTCCGAGTGGTTGAACAGGAGGACCTTGACCTGGCCGCGGTAGTCG 618310
Query 1572557 GCATCGATGACGCCTGCGCCGACGTCGATG 1572586
|| ||||||||||| ||||| |||||||
Sbjct 618311 GCGTCGATGACGCCCGCGCCCGTGTCGATG 618340
>seq5
Length=3440085
Score = 93.3 bits (102), Expect = 5e-13
Identities = 135/186 (73%), Gaps = 5/186 (3%)
Strand=Plus/Minus
Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025
||||| || |||||| || |||||||||||| |||||||||||||| ||||| || |
Sbjct 2328596 GTCGACATCCGGGTCGTTGATCAGGCCCTTCCAGCCGACGGTCGTGCGGGGCTTCTCCAA 2328537
Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAG 1727085
||||||||||||| | ||| || | | ||||| | | ||||||| || | | ||
Sbjct 2328536 GTAGGCGCGCATGATGATGCAGAGGTCAT--CCGACAACTTATCGGACAGAGACTTG-AG 2328480
Query 1727086 GC-GTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAA 1727144
| ||||| | || || | | ||| || |||||||| || || || ||||||| |
Sbjct 2328479 CCTGTCGG-CGTACTCAAGGGCGGTGGCGGGGTCGTGGATGGAGCAGGGGCCAACGACGA 2328421
Query 1727145 CCAGCA 1727150
| ||||
Sbjct 2328420 CAAGCA 2328415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107110231166901
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