Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 161 9e-35 seq5 98.7 9e-16 seq2 82.4 7e-11 >seq3 Length=3828249 Score = 161 bits (178), Expect = 9e-35 Identities = 956/1515 (63%), Gaps = 54/1515 (4%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| || || || || | || || || ||| ||||| |||| | || Sbjct 3341236 GTTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGG 3341295 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| || | |||||||| ||||||||||| | |||| ||||| |||||| |||| Sbjct 3341296 CTCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCAT 3341355 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 ||| | || || | |||||| |||||| | |||| | | ||||||||| Sbjct 3341356 CAACAAGCTGTTTCGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCA 3341415 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 | ||| ||| | | |||||| || || || | | |||| ||||| Sbjct 3341416 GAGATCAGAAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGAGA 3341475 Query 138741 GCCTTCGTACGAATCGTATACACCA--AACTCTTGCGCCAACTCGTTGCTCGCCTCGAGC 138798 || ||||| | | |||| || ||| |||| || | ||| ||| | Sbjct 3341476 TCCCTCGTATGTCTGGTATGGGCCGTCAAC-CTTG-GCGATGTCGCAAGACGCAGTCAAA 3341533 Query 138799 GCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCG 138858 ||| ||| ||| || || ||| ||||| | || ||| || ||||| | | ||| Sbjct 3341534 GCAGCATGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCA 3341593 Query 138859 TACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGG 138918 | ||||||||||| | ||| || || || || || || || || || || | || Sbjct 3341594 AAAGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCCTGGACACCAACACCAATGGGC 3341653 Query 138919 CGATGGCGCAGATTTGACGCTTTTG-----CGGCTTCGATAGGATAATAGTTTACATCGA 138973 | || |||| || ||| ||| | |||| | || || | ||| ||||| | Sbjct 3341654 CTGTGTCGCATGTT----GCTGTTGTATGCCTCCTTC-ACGGGGTAGTGGTTGACATCAA 3341708 Query 138974 TGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGT 139033 |||| ||||| || || || || || |||| || | | | | | || | || Sbjct 3341709 TGATCTTGTTCAAGTTGCGAACAACGACCTGGGTGACCTCGTGGAGATGCTGGAAGTTGT 3341768 Query 139034 ATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACA--AATCGAGGCTAT 139091 | | ||||| ||| | || ||| || | || || | ||| ||||| | Sbjct 3341769 AG------CAGTTGTTTTCGTAG---TCAACATAT--GCTGGCAGAGCAATGGAGGCCAG 3341817 Query 139092 GTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACT 139151 |||||| || ||||| || || || | | ||| |||| || |||| |||| || Sbjct 3341818 GTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGA 3341877 Query 139152 ACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAG 139211 | ||| || || | || | || ||||| || ||||| || ||||| ||||| || Sbjct 3341878 GCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAG 3341937 Query 139212 CATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGC 139271 ||| | || |||| || || || | ||| | ||| | ||| | | ||| Sbjct 3341938 CATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCTTCTGAGC 3341997 Query 139272 TTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGA 139327 | || ||| || || | | || | ||||||||| ||||| || | |||| Sbjct 3341998 CTTCATGGTCTTGCGGC-CGC---GGCCTTCTCTCTCGTACTTCTCGTACAGAGCCTCGA 3342053 Query 139328 A-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCAT 139386 | |||| |||||||| |||| ||| || | |||| || || |||||||| | ||| Sbjct 3342054 ACTCGT-CACCGTAGCATTCAGCAAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCAG 3342112 Query 139387 ACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAA 139446 |||||||| || || ||| ||||||| || || |||||||| | || | | | Sbjct 3342113 TCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGGGCAAGGAAGAGG 3342172 Query 139447 TCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACG 139506 ||||| ||| || ||| ||| ||| | || | ||||| ||||| || Sbjct 3342173 TCGCGGGCCCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAATCGAGGAACTCAAAGACA 3342232 Query 139507 TCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGA 139563 |||||||||||||| ||||| ||||| || | || || || ||| ||||| || Sbjct 3342233 TCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTGTTACCACCCTGG 3342292 Query 139564 TCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTT 139623 || |||| || ||| || ||||| || || | ||| || | ||| | | || Sbjct 3342293 TCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCATTTGACGTG 3342352 Query 139624 CCGTTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCC 139679 |||||||| |||| | | | | || ||| |||| ||| || || | || Sbjct 3342353 CCGTTGGTACCGGCTATATAAGAGCCAGTGGCG----CGGATACGATGGACGTTCAGACC 3342408 Query 139680 GATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTC 139738 || || ||| | | ||||| || | |||| || | | || ||||| ||||| Sbjct 3342409 AATACCTCCGGCCATCTTGGAGATCATGGCGCATGTCTTGAGA-GTATCGTAGATACCCT 3342467 Query 139739 TTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGC 139798 |||||||| |||| ||| ||| || ||||||||||| || || || | || | Sbjct 3342468 CAATGCTGTCATCCTTCATGTCGACGAGGAAGCATGACGACAGCTGAGGCTGGGGTGTAC 3342527 Query 139799 CGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACG 139858 | || ||||| ||||| ||||| ||||| | || | |||||||| | ||| | Sbjct 3342528 CAGCGTTGAACAGCGTAGGCGATGCGTGTGTGAAAAATTTGTGCGACATCAGGTTGTAAG 3342587 Query 139859 TTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATAT 139918 | || || | ||| | ||||| ||| |||||| |||| || ||||| | ||| | Sbjct 3342588 TCTCAATCACTCTCTCGATATCATCTCCCCAGATACCAACAGCAACACGCATGATCATGT 3342647 Query 139919 GTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAG--ATAACCGTTCTCTAGGGT 139976 | || ||||||| | || ||| |||| || || || |||| ||| | ||| Sbjct 3342648 GCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGACCG--CTCCAAGGT 3342705 Query 139977 CTTGTAGCCAAAGTA 139991 |||| |||| ||||| Sbjct 3342706 CTTGAAGCCGAAGTA 3342720 >seq5 Length=3440085 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || || || || || || || || Sbjct 3137827 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 3137886 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 3137887 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 3137946 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||||| || ||||| ||||| | | | | || || || ||| Sbjct 3137947 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 3138006 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || |||||||| Sbjct 3138007 ATCCAGAAGGAGTCTACTCTCCACTTGGT 3138035 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || || || || ||||| || || | Sbjct 3137596 ACCATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGTCT 3137655 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || ||||| || ||||| || ||||| ||||| || Sbjct 3137656 TCTGACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCTGAC 3137715 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || ||||||||||| || || || ||||| ||||| | | | | || || || Sbjct 3137716 CAGCAGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTAC 3137775 Query 24881 AACATTCAAAAGGAATCGACACTACAC 24907 ||||| || ||||| || || || ||| Sbjct 3137776 AACATCCAGAAGGAGTCCACCCTTCAC 3137802 >seq2 Length=4895233 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || || | Sbjct 4675369 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACCCTTGAGGTGGAGTCCTCG 4675428 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 4675429 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 4675488 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||| ||||| | | | | || || || ||| Sbjct 4675489 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 4675548 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || ||| | |||||||| Sbjct 4675549 ATCCAGAAGGAGAGCACCCTTCACCTCGTGTTGCG 4675583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895614826840