Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 >seq1 Length=5395810 Score = 114 bits (126), Expect = 1e-20 Identities = 197/286 (69%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 ||||||| ||||| | || | | || | || ||||| | |||||| |||||| | Sbjct 690440 CAGTCTCGGGGTTCTTGCACTTGTGGCAGAGAACGAACTTCCTGATGAAGATATCAAGAA 690381 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 ||||||| | ||| || || || | ||||||| ||| | || || | ||| | Sbjct 690380 GGTCCTGGAGCTTGCTAGACTCATGAGCACCGTTGATGATCCAGCGATCATCCTTGGGGT 690321 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498 | | | || || || || || ||| | |||||| |||| || ||| | | |||| Sbjct 690320 CAATGTTGGTCTGAGCACCAAGTTCGAAACCGAAGAACTTGATCAAGTAGGAGCCAGGAC 690261 Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 | | || | || ||||| || || |||||| ||||| |||||||| |||||||||| Sbjct 690260 GAGCGAGGGACTGGGCGACGCTGGTCAGGTTGACAATGACGGTCTTGATACCGTTGCCCT 690201 Query 34559 TTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604 | ||||||||||||| || ||| ||| |||||||| ||||| Sbjct 690200 TGCCTTCGACCTTGGTCTGGAGACGCTCCATCTTGTAGCGATAGAA 690155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839823878029