Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq7 188 1e-41
seq10 129 9e-24
seq3 129 9e-24
seq1 118 2e-20
seq2 107 3e-17
seq8 93.3 7e-13
>seq7
Length=2986693
Score = 188 bits (208), Expect = 1e-41
Identities = 357/521 (69%), Gaps = 12/521 (2%)
Strand=Plus/Minus
Query 2018925 GAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTGCCTAC 2018984
|| ||||||||||| | |||||||||||||| ||||||| | | | | |
Sbjct 2054825 GAGAAGTACCGCCCCGTCTTCCTCGACGACATCGTCGGCAACGTCGAGACGATAGAACGC 2054766
Query 2018985 CTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGC 2019044
|||||| | ||| ||||||||||||||| || || | | | ||| |||||||
Sbjct 2054765 CTCAAGATCATCGCCAAGGACGGCAACATGCCCCACGTCATCATCTCAGGCATGCCCGGC 2054706
Query 2019045 ACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGAC 2019104
| |||||||| || ||| | ||||| ||||| |||| |||||| || | |
Sbjct 2054705 ATCGGCAAGACGACCAGCGTGCTCTGCCTCGCGCGACAGCTCCTGGGCGACGCATACAAG 2054646
Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164
|||||||| || || ||||| || || |||||||||||| | ||||| ||||| | |
Sbjct 2054645 GAGGCCGTACTGGAGCTCAACGCCTCGGACGAGCGCGGCATAGACGTGGTGCGGAACCGC 2054586
Query 2019165 ATCAAGCATCACGCTTCG---AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGA 2019219
|||||| |||||| | ||||| || ||||| ||||| || ||||||||
Sbjct 2054585 ATCAAG-----GGCTTCGCCCAGAAGAAGGTCACGCTGCCTCCCGGGCGGCACAAGGTTG 2054531
Query 2019220 TCATCCTCGATGAGGCCGACTGCCTTACG-TCGGCGGCCCAGCAGGCCCTCCGATCGACC 2019278
|||||||||| ||||| ||| || | ||| |||| || ||||||||| | | |||
Sbjct 2054530 TCATCCTCGACGAGGCGGACAGCATGACGAGCGGC-GCGCAGCAGGCCTTGAGGCGGACT 2054472
Query 2019279 ATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTC 2019338
||||| | ||| | || || || |||| || | || |||||| ||| | | ||
Sbjct 2054471 ATGGAGATCTACTCGAATACTACTAGGTTCGCATTTGCGTGCAACCAGTCCAACAAGATC 2054412
Query 2019339 ATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAG 2019398
||||| | || ||| || || || ||| |||| | |||| | || || || | ||||
Sbjct 2054411 ATCGAGCCGCTGCAGTCGCGATGTGCGATCCTGCGGTATGCGAGGCTGACGGATGGCCAG 2054352
Query 2019399 ATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGT 2019439
| | | ||| |||| || | ||||| || || |||||
Sbjct 2054351 GTGGTCAAGCGCCTGCTGCAGGTCATCGAGGCGGAGAAGGT 2054311
>seq10
Length=1984115
Score = 129 bits (142), Expect = 9e-24
Identities = 199/280 (71%), Gaps = 7/280 (3%)
Strand=Plus/Minus
Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442
|| || ||||||||| ||| ||||| | |||||||||| ||| ||||| ||
Sbjct 928883 AGGTCGATCTTGGAGTTGGCGTCGCTCGACGACATCTTGCCGCCCTGC---AGGCCGGGG 928827
Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGC 2411502
|||| ||||| | | ||| ||||| |||||| |||||| ||||| |||
Sbjct 928826 ACCATGGGGTTCATGATGTGCGCGCGCTGGCGGTACCCCAGCTTGGGCAGCCAGTCCTTG 928767
Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562
|| | |||| ||||||||||||| ||||| ||||| |||| ||| |||||| |
Sbjct 928766 GCGGCCGTGAAGAGCTTGCGCTGGTCGACGCCGCCGAACTGCACGTCCACGCCGAGGTAC 928707
Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGGTC 2411621
||||||||||| |||||| || ||||||| ||| | || |||| ||| || ||
Sbjct 928706 TGCTCGTCGAGCACCTGCAGGACGGGGTAGAGCAGGCCGGACAGGGGCGCGTTGGCCGT- 928648
Query 2411622 CATCTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGC 2411659
| |||||| |||| |||| |||||| || ||| |||||
Sbjct 928647 CTGCTTGACGACCTCGGCGCCGGCCTTCTTGGCGTCGTGC 928608
>seq3
Length=3828249
Score = 129 bits (142), Expect = 9e-24
Identities = 275/412 (67%), Gaps = 10/412 (2%)
Strand=Plus/Plus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| || || ||||||||||||||||| | || |||| |||||||||| ||||||
Sbjct 3341850 ACTCGATGATCTCGGTGCACAGGTTGGAG--CTGCGGATGGTTCCCAGGTTCTTCTGGTT 3341907
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
||| | ||||| ||| ||||||| |||||| |||| || |||||| |||| ||
Sbjct 3341908 GCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGC 3341967
Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CG--CGCGGCCCTN 2071748
| || |||||| |||| | | | || || |||| | || ||||||| |
Sbjct 3341968 CTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCAT---GGTCTTGCGGCCGCGGCCTTC 3342024
Query 2071749 NNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGG 2071808
| || || || || || | |||| ||| || ||||||||
Sbjct 3342025 TCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCATTCAGCAAGGCCGGG 3342084
Query 2071809 CGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAG 2071868
|||| ||||| | ||| | |||||||||| || | || || ||| || ||
Sbjct 3342085 GCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAG 3342144
Query 2071869 GTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTT 2071928
||| |||| ||| | ||||| ||||| |||||| ||||||||| ||||||||
Sbjct 3342145 GTCAGGAATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGTT 3342204
Query 2071929 CTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980
|||| || ||||| | || | || || |||||||| ||||||||||||
Sbjct 3342205 CTTTCGCAAATCGAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAG 3342256
>seq1
Length=5395810
Score = 118 bits (130), Expect = 2e-20
Identities = 182/255 (71%), Gaps = 6/255 (2%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 863252 TGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAA 863311
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC-- 794008
| ||||| |||||| | ||| ||||||| | | |||| ||||||| ||
Sbjct 863312 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACTTGTAGACCTTCTCGTTGCCAA 863371
Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
| |||||| || || |||||||| ||||| || |||||||| ||| ||| ||||||
Sbjct 863372 GGGCGACG--AGGAGACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTT 863429
Query 794069 CATGCCGATGAG-CGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGG 794127
|||||||| || | || ||| || | ||| | | ||||| ||||| || ||||||
Sbjct 863430 CATGCCGAGCAGACTGCA-GGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGGCGACGG 863488
Query 794128 CCTCGATGATGATCT 794142
| || |||||||||
Sbjct 863489 CATCAGTGATGATCT 863503
Score = 116 bits (128), Expect = 6e-20
Identities = 102/127 (80%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
|| || ||| | || || || ||||||||| | ||||||||| | || || ||| | ||
Sbjct 3993561 CTGTTCGAGATCATTCTTGCTGCCAACTACATGGACATCAAGGCGCTTCTGGATGTCGGC 3993620
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
|||||||| || |||||| | |||||||||||||| |||||||| || |||||||| ||
Sbjct 3993621 TGCAAGACAGTTGCCAACATGATCAAGGGCAAGTCTCCCGAGGAGATTCGCAAGACTTTC 3993680
Query 2035749 AACATCA 2035755
|||||||
Sbjct 3993681 AACATCA 3993687
Score = 86.0 bits (94), Expect = 1e-10
Identities = 136/195 (70%), Gaps = 9/195 (5%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||||| |||||| ||| ||||| ||||| || ||||||||
Sbjct 863574 ACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGACCGCGCTT 863633
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||| ||||| ||||||| |||| || ||| ||||| ||||| || || || ||
Sbjct 863634 CTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCTCAACAGCAGCGAA 863693
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTG---TCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516
| | || || |||| ||| | ||| || || || |||||||||||| ||
Sbjct 863694 GGCAACCAGACGCTGGGCGTAGGTGGACTCGTGGTCC------GTGATCCACTTCAGGGC 863747
Query 794517 CCACTCTGCCTTTTT 794531
||| || ||||| ||
Sbjct 863748 CCAGTCGGCCTTCTT 863762
>seq2
Length=4895233
Score = 107 bits (118), Expect = 3e-17
Identities = 98/121 (81%), Gaps = 2/121 (2%)
Strand=Plus/Minus
Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCG-TCAGACGAGGC 2233149
|||||||| ||||| || |||||||| ||||||||||| ||||| || ||| || ||
Sbjct 2845747 GTCGCCTTCCCCACAGAAACCGTCTACGGCCTCGGCGCGGACGCCACGCTCAC-CGCCGC 2845689
Query 2233150 CGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACGT 2233209
||| || |||||| | |||||||||||| || || |||||||| |||||||||||||
Sbjct 2845688 CGTCAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCGGACAACCCGCTCATCGTGCACGT 2845629
Query 2233210 G 2233210
|
Sbjct 2845628 G 2845628
>seq8
Length=2839550
Score = 93.3 bits (102), Expect = 7e-13
Identities = 118/160 (74%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 1485546 GGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCG-GCCGG 1485604
|||||||||||| |||| | ||| ||| |||||| || ||| | || | ||
Sbjct 2084561 GGTCTGGATCTCTCGGGAGGAGATGGTGGACTTCTTGTT-GTAGGCGGCGAGCTTGGAGG 2084503
Query 1485605 CCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATT 1485664
|||||||| ||| || || | ||||||||||| || ||||||| ||| ||||| |
Sbjct 2084502 CCTCGGTGGCGACCCGCTCAAAGATGTCGTTGACGAAAGAGTTCAGGATAGACATGGCAC 2084443
Query 1485665 TGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||||||||| || ||||||||| ||||||||||| ||
Sbjct 2084442 GGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 2084403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916208849779967
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |