Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq109 156 3e-32
seq6 95.1 9e-14
>seq109
Length=4663
Score = 156 bits (172), Expect = 3e-32
Identities = 257/366 (70%), Gaps = 6/366 (2%)
Strand=Plus/Minus
Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT-CC 282252
|||||||| ||||||||||| | ||| ||| || |||| |||| |||||| ||
Sbjct 2129 TCAAAATCATCACCTCCCAAAGCATTATCTCCAGAAGTAGAAAGCACTTC-AAAAGTACC 2071
Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312
|| | | || | || || ||||||| ||||| || || | ||||| | | |
Sbjct 2070 GTCAACCAAAGTTAGAATAGAAACATCAAAAGTTCCTCCTCCTAAGTCAAACACTAAAAT 2011
Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372
|| ||||||||| ||| |||| |||||| | || |||||| |||||||||||
Sbjct 2010 GGTCTGTTCTTTGTCACC---TTTGTCAACACCATAAGAAAGAGCAGCTGCAGTTGGTTC 1954
Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432
|||||||| | |||||| | || |||||| | ||||||||||| || || |||||
Sbjct 1953 GTTAATAATACGTTCAACATTTAAGCCTGCAATTTTACCTGCATCTTTGGTAGCCTGTCT 1894
Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492
||| | ||| |||||||| |||||||||||||| || || | |||||| ||| |
Sbjct 1893 TTGAGCATCATTAAAATAAGCAGGAACAGTAATTACTGCCTTACTTACTTGGGCTCCTAA 1834
Query 282493 ATAAGCGCTTGCTG-TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551
|||| | || | ||| ||||| || |||||||||| ||||| || |||||
Sbjct 1833 ATAATCTTCAGCAGTTTTTTTTCAAATTTGCCAAAATCATTGCACTAATTTCTTGTGGAG 1774
Query 282552 AATATT 282557
||||
Sbjct 1773 TGTATT 1768
Score = 96.9 bits (106), Expect = 3e-14
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 86118 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 86177
||| || | |||||| |||||||||||||| ||||| || ||||| ||| || ||
Sbjct 1983 ACCATAAGAAAGAGCAGCTGCAGTTGGTTCGTTAATAATACGTTCAACATTTAAGCCTGC 1924
Query 86178 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 86237
||||||| | | ||| || || ||||| || || ||||||||||| || || |||||
Sbjct 1923 AATTTTACCTGCATCTTTGGTAGCCTGTCTTTGAGCATCATTAAAATAAGCAGGAACAGT 1864
Query 86238 AATAACTGCTTTA 86250
||| ||||| |||
Sbjct 1863 AATTACTGCCTTA 1851
>seq6
Length=3351076
Score = 95.1 bits (104), Expect = 9e-14
Identities = 97/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
|| || || |||||| || |||| || ||||||||||||||||| ||| | ||||| |||
Sbjct 801084 GGCAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGAAAGCGTGTGGATTTCTCTGCCCGT 801025
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| || ||||| |||| | |||||| |||| | ||||| ||||| || | | |||
Sbjct 801024 ACCGTCATTACAGGTGATGCAAATATTTCTCTGGACGAAGTCGGTGTACCGCGGAGCATT 800965
Query 432408 GCGAAAA 432414
|||| ||
Sbjct 800964 GCGAGAA 800958
Score = 93.3 bits (102), Expect = 3e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
||||| |||||||| | ||||||||||| |||||| | ||| |||| || | || ||
Sbjct 799650 GAATTCTTCTTCCACGCCATGGCTGGTCGAGAAGGTTTGATTGATACCGCAGTCAAGACC 799591
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252
||||| || ||||| ||||| | |||||||||| |||||||||| | | | ||
Sbjct 799590 GCTGAAACAGGTTACATTCAGCGCCGACTTGTCAAGGCGCTTGAAGATGTCACCGCAAAA 799531
Query 435253 TATGATGGTACAGT 435266
|| |||||||| ||
Sbjct 799530 TACGATGGTACCGT 799517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740613069191778
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |