Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq109 156 3e-32 seq6 95.1 9e-14 >seq109 Length=4663 Score = 156 bits (172), Expect = 3e-32 Identities = 257/366 (70%), Gaps = 6/366 (2%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT-CC 282252 |||||||| ||||||||||| | ||| ||| || |||| |||| |||||| || Sbjct 2129 TCAAAATCATCACCTCCCAAAGCATTATCTCCAGAAGTAGAAAGCACTTC-AAAAGTACC 2071 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 || | | || | || || ||||||| ||||| || || | ||||| | | | Sbjct 2070 GTCAACCAAAGTTAGAATAGAAACATCAAAAGTTCCTCCTCCTAAGTCAAACACTAAAAT 2011 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 || ||||||||| ||| |||| |||||| | || |||||| ||||||||||| Sbjct 2010 GGTCTGTTCTTTGTCACC---TTTGTCAACACCATAAGAAAGAGCAGCTGCAGTTGGTTC 1954 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 |||||||| | |||||| | || |||||| | ||||||||||| || || ||||| Sbjct 1953 GTTAATAATACGTTCAACATTTAAGCCTGCAATTTTACCTGCATCTTTGGTAGCCTGTCT 1894 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 ||| | ||| |||||||| |||||||||||||| || || | |||||| ||| | Sbjct 1893 TTGAGCATCATTAAAATAAGCAGGAACAGTAATTACTGCCTTACTTACTTGGGCTCCTAA 1834 Query 282493 ATAAGCGCTTGCTG-TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 |||| | || | ||| ||||| || |||||||||| ||||| || ||||| Sbjct 1833 ATAATCTTCAGCAGTTTTTTTTCAAATTTGCCAAAATCATTGCACTAATTTCTTGTGGAG 1774 Query 282552 AATATT 282557 |||| Sbjct 1773 TGTATT 1768 Score = 96.9 bits (106), Expect = 3e-14 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 86118 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 86177 ||| || | |||||| |||||||||||||| ||||| || ||||| ||| || || Sbjct 1983 ACCATAAGAAAGAGCAGCTGCAGTTGGTTCGTTAATAATACGTTCAACATTTAAGCCTGC 1924 Query 86178 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 86237 ||||||| | | ||| || || ||||| || || ||||||||||| || || ||||| Sbjct 1923 AATTTTACCTGCATCTTTGGTAGCCTGTCTTTGAGCATCATTAAAATAAGCAGGAACAGT 1864 Query 86238 AATAACTGCTTTA 86250 ||| ||||| ||| Sbjct 1863 AATTACTGCCTTA 1851 >seq6 Length=3351076 Score = 95.1 bits (104), Expect = 9e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 || || || |||||| || |||| || ||||||||||||||||| ||| | ||||| ||| Sbjct 801084 GGCAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGAAAGCGTGTGGATTTCTCTGCCCGT 801025 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || ||||| |||| | |||||| |||| | ||||| ||||| || | | ||| Sbjct 801024 ACCGTCATTACAGGTGATGCAAATATTTCTCTGGACGAAGTCGGTGTACCGCGGAGCATT 800965 Query 432408 GCGAAAA 432414 |||| || Sbjct 800964 GCGAGAA 800958 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||| |||||||| | ||||||||||| |||||| | ||| |||| || | || || Sbjct 799650 GAATTCTTCTTCCACGCCATGGCTGGTCGAGAAGGTTTGATTGATACCGCAGTCAAGACC 799591 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 ||||| || ||||| ||||| | |||||||||| |||||||||| | | | || Sbjct 799590 GCTGAAACAGGTTACATTCAGCGCCGACTTGTCAAGGCGCTTGAAGATGTCACCGCAAAA 799531 Query 435253 TATGATGGTACAGT 435266 || |||||||| || Sbjct 799530 TACGATGGTACCGT 799517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740613069191778