Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 246 3e-60
seq5 127 2e-24
seq1 127 2e-24
seq2 125 7e-24
seq4 114 1e-20
>seq3
Length=3828249
Score = 246 bits (272), Expect = 3e-60
Identities = 994/1541 (65%), Gaps = 41/1541 (3%)
Strand=Plus/Plus
Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319
|| || ||||| |||||||| || ||||| || ||| | || | ||| || | ||
Sbjct 3341237 TTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGC 3341296
Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379
|| || ||||||||||||||| |||||||| || | ||| || |||||| || | |
Sbjct 3341297 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATC 3341356
Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTAT-TTTGCGCTTCAGAGCCGCCCAGTCCCA 148438
| || ||| || | |||| | | || || ||||| ||||| ||| ||||||||||
Sbjct 3341357 AACAAGCTGTTTCGGATACCGTGCTCCTTGATCTTTGC-CTTCAAAGCATCCCAGTCCCA 3341415
Query 148439 GAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAG-CGGGGC 148497
||| || || ||| ||||||||| || || || || | | || || ||||
Sbjct 3341416 GAGATCAGAAGGCTGGACGCCCCACATGTCATATTGAAG-CTGTCCCTGCGAGACGGGAG 3341474
Query 148498 TGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCG 148557
|||||||| | ||| || |||| || || | ||||| ||| | |
Sbjct 3341475 ATCCCTCGTATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAG 3341534
Query 148558 CGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGT 148617
| | | ||| || |||||| || || |||| ||| | ||| | ||
Sbjct 3341535 CAGCATGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAA 3341594
Query 148618 ACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCC 148677
| ||||| || || || || || || ||||| ||||| || || || ||||||||||
Sbjct 3341595 AAGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCCTGGACACCAACACCAATGGGCC 3341654
Query 148678 GGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCT 148737
|||| |||||| | | || || | || ||||||||| || |||||||
Sbjct 3341655 TGTGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCT 3341714
Query 148738 TG-TCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGT---AC 148793
|| ||||| ||||| || || |||| || | | | || | || | || |
Sbjct 3341715 TGTTCAAG-TTGCGAACAACGACCTGGGTGACCTCGTGGAGATGCTGGAAGTTGTAGCAG 3341773
Query 148794 TTGTCATC-TACGATGCATCGGTT--CACGGCGATAGAGGCTAGATTGCACACGGCCGTC 148850
|||| || || ||| | | || || || ||||| || ||||| || ||| |
Sbjct 3341774 TTGTTTTCGTAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACC 3341833
Query 148851 TCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCC 148910
||||| || || | |||||| | |||||||| |||||| ||| || ||| |||
Sbjct 3341834 TCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCC 3341893
Query 148911 ACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCA 148970
| |||||| || |||||||||| |||||| || |||||||| |||||| | || |||
Sbjct 3341894 AGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCG 3341953
Query 148971 GTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCCTGCGCGCGCA----CTTG 149023
|| || ||| | || | || | ||| ||| | ||| || || ||||
Sbjct 3341954 GTCTCGGTCTGGGCCTCGAGGATGGCGTACC---ACAGCTTCTGAGCCTTCATGGTCTTG 3342010
Query 149024 CTGCTCGTAGCGACCCTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCG 149081
| || ||| || || |||||| | ||| | ||| ||||||| | || |||
Sbjct 3342011 CGGC----CGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGC--CTCGAACTCGTCACCG 3342064
Query 149082 TAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCG 149141
||||| || | || |||||||||| || ||||||||||| | ||| |||||| |
Sbjct 3342065 TAGCATTCAGCAAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTC 3342124
Query 149142 TACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTG 149201
| || |||||||| || || || || | |||||| || | ||||||||| ||| |
Sbjct 3342125 TCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGG 3342184
Query 149202 CAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCAC 149261
|| || || ||| |||| | ||| | || | || ||||||||
Sbjct 3342185 ACCTCCTCCTTACCGTGGTTCTTTCGCAAATCGAGGAACTCAAAGACATCAGCGTGCCAT 3342244
Query 149262 GGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGC 149318
||||| | ||| | |||| || || |||||| || |||||||| |||| ||
Sbjct 3342245 GGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTGTTACCACCCTGGTCAACGTAACGG 3342304
Query 149319 ACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTA-GA 149377
| ||||||| || || |||| ||| || || ||| | | |||||||| |||
Sbjct 3342305 GCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCATTTGACGTGCCGTTGGTACCG 3342364
Query 149378 GCTA-ATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGT 149436
|||| || || ||| || || | || ||||| | || || || ||| |
Sbjct 3342365 GCTATATAAGA--GCCAGTGGCGCGGATACGATGGACGTTCAGACCAATACCTCCGGCCA 3342422
Query 149437 ACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGC 149495
||| ||||| ||||| ||| ||| || |||||| ||||| |||||||| |
Sbjct 3342423 TCTTGGAGATCATGGCGCATGTC-TTGAGAGTATCGTAGATACCCTCAATGCTGTCATCC 3342481
Query 149496 TTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATG 149555
|||||| | || ||||| || ||| || || | || || || |||||
Sbjct 3342482 TTCATGTCGACGAGGAAGCATGACGACAGCTGAGGCTGGGGTGTACCAGCGTTGAACAGC 3342541
Query 149556 GTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGG 149615
|| || |||||||| ||| |||| || ||||| | ||| | ||| | ||| |
Sbjct 3342542 GTAGGCGATGCGTGTGTGAAAAATTTGTGCGACATCAGGTTGTAAGTCTCAATCACTCTC 3342601
Query 149616 TCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCC 149675
|| || ||||| || ||| || | || || ||||| | ||| ||||| || || ||
Sbjct 3342602 TCGATATCATCTCCCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCG 3342661
Query 149676 GCCACTTTGTTTCCAATTTTGAGCAAGTA-GCCGTTTTCTAGTGTCTTGTAGCCAAAGTA 149734
| |||||| | | ||||| | ||| | | | | || |||||| |||| |||||
Sbjct 3342662 ACGACTTTGCCATCGAGCTTGAGGAGGTATGACCGCTCCAAG-GTCTTGAAGCCGAAGTA 3342720
Query 149735 CTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775
| |||| | ||||| ||| | | ||||||| | |||||
Sbjct 3342721 TTGGTAGCCGAAGTCTCGGTCATATACAATGGCCGAGTCGA 3342761
>seq5
Length=3440085
Score = 127 bits (140), Expect = 2e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| | ||| |||||| |||||||||||
Sbjct 3137796 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCC 3137737
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | ||||||||||| |||||||| || |||||||| ||||| |||
Sbjct 3137736 AGCGAAGATCAAACGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTT 3137677
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||| | | |||||| |||| ||||| ||| ||||| || || ||
Sbjct 3137676 GACGTTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGGGT 3137617
Query 133643 TTTTACGAAAATCTGCATGG 133662
|| ||||| ||||||||||
Sbjct 3137616 CTTCACGAAGATCTGCATGG 3137597
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| || ||||| ||| | ||| ||||||||||||||| ||
Sbjct 3138023 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 3137964
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || || ||||||||||| || |||||||| |||||||| |||||| ||||
Sbjct 3137963 GCAAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 3137904
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||||||| || ||| || || | |||| ||| |||||||| || ||
Sbjct 3137903 ACGTTGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTC 3137844
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||| || |||||
Sbjct 3137843 TTGACGAAGATTTGCAT 3137827
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| || || ||| | | | || || |
Sbjct 3138260 AAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCA-TCTTCCAA 3138202
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || ||| | ||||| ||||||||||| || ||||| || |||||||| ||
Sbjct 3138201 CTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAAT 3138142
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | || | ||||| | || |||||| || | || | || || ||
Sbjct 3138141 CTTGCTCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGTGTTATCGTCTTTCC 3138082
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||||| ||||||||
Sbjct 3138081 CGTCAATGTCTTGACGAAGATCTGCAT 3138055
>seq1
Length=5395810
Score = 127 bits (140), Expect = 2e-24
Identities = 352/527 (67%), Gaps = 31/527 (6%)
Strand=Plus/Plus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || ||||| || ||||| || ||||| || ||||| | | || ||||| |
Sbjct 863265 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 863324
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | | || || ||| | ||| | ||||| ||
Sbjct 863325 CATGAAGTCGAAGGGGTTGGTGGACTTGTAGACCTTCTCGTTGCCAAGGGCGACGAGGAG 863384
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCA-ACG 120529
||||| || || ||||| ||||||| ||| | ||||||||||| |||| ||
Sbjct 863385 ACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGACT 863444
Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589
|| || | ||| || | ||||||||||||||| | || || || ||| ||
Sbjct 863445 GCAG-GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGGCGACGGCATCAGTGA---TG- 863499
Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTC----GGT---AGTACAG- 120641
|| | | | || || |||| | ||| |||| ||| || ||||
Sbjct 863500 -----ATCTTCTCGACGCGCGCCTTGCT---GGGGCG-GTTCCTCAGGTGAGAGAACAGC 863550
Query 120642 --GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699
||| || ||||| |||||||| |||||||| || || |||||||||||| || |||
Sbjct 863551 AGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTC 863610
Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGC-AAAGCTGCCCGAAAA 120758
||||| ||||| | || | |||| | |||| |||| ||| ||||| || ||
Sbjct 863611 AGGCCAGGCATCAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGC-ACCGCTGAA 863669
Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-- 120816
||| | ||||| || || ||||| |||| |||| ||| | || | | || ||
Sbjct 863670 GAAGATACCCTCAACAGCAGCGAAGGCAACCAGACGCTGGGCGTAGGTGGAC-TCGTGGT 863728
Query 120817 CTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
| || ||||||||||| |||||| |||||||| || || | ||| ||
Sbjct 863729 CCGT-GATCCACTTCAGGGCCCAGTCGGCCTTCTTACGGATGCAGGG 863774
>seq2
Length=4895233
Score = 125 bits (138), Expect = 7e-24
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||| ||| ||||| || ||||| ||| | ||| ||||||||||||||||||
Sbjct 4675566 GGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 4675507
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || |||||||||||||| |||||||| |||||||| ||||| |||
Sbjct 4675506 GGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTT 4675447
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||| | || |||||| || | ||||| ||| || || || || ||
Sbjct 4675446 GACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGTCTTCCCCGTGAGGGT 4675387
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 4675386 CTTGACGAAGATCTGCATG 4675368
>seq4
Length=3484069
Score = 114 bits (126), Expect = 1e-20
Identities = 135/180 (75%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| ||| || ||| | | | ||||||||||||||||| ||| | ||
Sbjct 949905 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 949847
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
| ||||||||||| || |||||||| |||||||| |||||| ||||| | ||
Sbjct 949846 CAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTC 949787
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| ||||||| || ||| || || | ||||| ||| ||||| ||||| || || |||||
Sbjct 949786 GATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 949727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483418666905720
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