Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5 140 4e-28 >seq5 Length=3440085 Score = 140 bits (154), Expect = 4e-28 Identities = 274/402 (68%), Gaps = 10/402 (2%) Strand=Plus/Minus Query 147105 CACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 |||||| ||||| ||| | ||||| || |||||||||||||| || ||| |||| Sbjct 1320457 CACGTAGAACTGCGCAAAC-ATGTGACAAGGCGGCAGCGCCATCTTCTTCAAGTCGGCGG 1320399 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||| || | | | || | | | |||||| || | || | || Sbjct 1320398 GGTTCCACGCGCTCATGATGATGCGGCGGTCGTACGGGTTCGTCCGCAGCTTGTGGA--- 1320342 Query 147224 CCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTAC 147279 ||||||| |||||||| ||||||||||| |||||| || | | ||| |||||| Sbjct 1320341 -CCACCTCGGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCGGTGCGGGCGTCGACGTAC 1320283 Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG 147339 ||| || ||||| | ||||||||| |||||||| || ||||||||||||| || | | Sbjct 1320282 TCGGCGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCGG 1320223 Query 147340 TGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 || || ||| | | | ||| |||||| | || |||| | |||||||||| || Sbjct 1320222 TGGCCGAGCCCCACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACG 1320163 Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCC 147459 |||| | || ||| || ||| | ||| | || ||||||||||||||| | Sbjct 1320162 CCCTGCTCCGACAGCGAGAGCGACGACGTCGCGCCGCTGACGAACCAGAGCAGCTCGGCG 1320103 Query 147460 AAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGG 147501 | || ||| ||||| | |||||| ||||| |||||| Sbjct 1320102 AGCACGGCCCGGTGGAAGACGCGCTTGGTCGTCAGGAGGGGG 1320061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485425359200