Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2 113 4e-20 seq5 109 5e-19 seq4 102 7e-17 >seq2 Length=4895233 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | |||||| | || | || |||||||| || |||||||| |||| Sbjct 4675595 CCACCACGGAGGCGCAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 4675536 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || |||||||| || || || |||| ||||||||||| | || Sbjct 4675535 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 4675476 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| ||||| ||| | | | | | ||||| || |||||| Sbjct 4675475 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACC 4675416 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||| | || || || || |||||||| Sbjct 4675415 TCAAGGGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 4675369 >seq5 Length=3440085 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 ||||||||| | | | |||||| || | ||| |||||| || |||||||| || | Sbjct 3138282 TCCACCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGA 3138223 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 || || || | || |||| |||||| || || || || | ||||||||||| | || Sbjct 3138222 CAGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGG 3138163 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCA 35687 | | |||||||||| ||||| ||||| |||| | | ||||| || |||| Sbjct 3138162 GATACCCTCCTTGTCCTGAATCTTGCTCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCA 3138104 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| || ||||| || |||||||| || || || || |||||||| Sbjct 3138103 CCTCCAGTGTTATCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 3138055 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || |||| || |||||||| || || || Sbjct 3137790 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 3137731 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | ||| | | |||||||||| ||||| ||| | || Sbjct 3137730 GATCAAACGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 3137672 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||| | ||||| || || || || | || |||| Sbjct 3137671 TGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCA 3137612 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 3137611 CGAAGATCTGCAT 3137599 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||| || |||||||| |||| Sbjct 3138053 CCACCACGGAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3137994 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || |||||||| || ||||| |||| ||||||||||| | || Sbjct 3137993 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGG 3137934 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||||| |||||| ||| | |||| | | |||||| || || || Sbjct 3137933 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATAGTGTCGGAGGACTCGAC 3137875 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || || || || | || || || || || ||||| Sbjct 3137874 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 3137827 >seq4 Length=3484069 Score = 102 bits (112), Expect = 7e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| |||| || ||| || | || || |||||||| || || || | Sbjct 949907 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 949848 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 |||| ||||||||||| | || | || |||||||||| |||||| ||| | | | Sbjct 949847 TCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 949788 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | |||||| || || ||||| | ||||| || || ||||||| || ||||| | Sbjct 949787 CGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 949728 Query 35727 A 35727 | Sbjct 949727 A 949727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791610873240