Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq5 100 2e-16 >seq5 Length=3440085 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || ||||||||| | | |||| |||| ||| Sbjct 3138035 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 3137976 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || ||||| | || || ||||| || || || || | ||||| || || | Sbjct 3137975 AGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 3137916 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | | || | |||||| | || || || || ||||| || | ||| Sbjct 3137915 ATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTG 3137856 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || || |||||||||||| Sbjct 3137855 CCGGTGAGGGTCTTGACGAAGATTTGCATA 3137826 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | ||||| || || || || |||||||| | Sbjct 3138281 CCACCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 3138222 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| | ||| || || ||| | ||||||||||| || || || || Sbjct 3138221 AGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 3138162 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || |||||| | |||| | | || | ||||| | || || || Sbjct 3138161 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3138102 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| | || ||||||| || || || ||||| |||||| Sbjct 3138101 TCCAGTGTTATCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCATA 3138054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932571852536