Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq3 293 3e-74
seq15 95.1 2e-14
seq1 87.8 2e-12
>seq3
Length=3828249
Score = 293 bits (324), Expect = 3e-74
Identities = 1018/1577 (65%), Gaps = 35/1577 (2%)
Strand=Plus/Plus
Query 110551 CTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAG 110610
||||||||| | ||||| | ||| |||||||| ||||| | | | || |
Sbjct 3341119 CTTGATATCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATAATACG 3341178
Query 110611 ATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTT 110670
| ||||||| ||| ||||| |||||||||| | ||||| ||| || |||
Sbjct 3341179 GTTCTTCATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTT 3341238
Query 110671 GACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTC 110730
||| | ||||| || || || | || | |||||||||| | |||||||| ||
Sbjct 3341239 GACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTC 3341298
Query 110731 AAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAA 110790
||||| || || || |||| || || | ||||| || || ||||| |||||||||||
Sbjct 3341299 GAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATCAA 3341358
Query 110791 AAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTT 110850
| ||||| || | ||| | ||||||||| | |||| | | |||||||||| ||
Sbjct 3341359 CAAGCTGTTTCGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAGA- 3341417
Query 110851 GAGCTT--GGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAA 110908
|| | || | || ||||||||||| | |||||| || || || |||||||
Sbjct 3341418 GATCAGAAGGCTGGACGC-CCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGAGAT 3341476
Query 110909 CCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGAT 110968
||||| | || | || | || | | | || | || || ||| || |
Sbjct 3341477 CCCTCGTATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCA 3341536
Query 110969 GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT 111028
|| || || ||||| || ||||| | |||| || || ||| || |||||
Sbjct 3341537 GCATGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAAA 3341596
Query 111029 GCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTG 111088
| |||| | || |||| || ||||| || ||||| | |||||| || |||
Sbjct 3341597 GGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCCTGGACACCAACACCAATGGGCCTG 3341656
Query 111089 TGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGA-CTCG 111147
|||||||| || || || || ||||| || || ||||||| || |
Sbjct 3341657 TGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTG 3341716
Query 111148 GTTTAGATTTTTGGTAACAAT---CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGT 111204
| || ||| ||||| || |||| || || || | | | | |
Sbjct 3341717 TTCAAG----TTGCGAACAACGACCTGGGTGACCTCGTGGAGATGCTGGAAGTTGTA--- 3341769
Query 111205 GCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGC 111261
|| | | ||| | | ||||| ||| || || || || |||| ||||| |||||
Sbjct 3341770 GCAGTTGTTTTCGTAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGC 3341829
Query 111262 CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGT 111321
| |||||| | | |||||| | || || || || | |||||| || || ||
Sbjct 3341830 CACCTCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGT 3341889
Query 111322 CCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 111381
|||| ||||| ||||| ||||| |||||| |||||||||||||||||| |||| |
Sbjct 3341890 TCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTT 3341949
Query 111382 CCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGG 111440
|| ||||| ||||| | | ||| || || | ||| | | || | | || ||||
Sbjct 3341950 GCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTC----ATGG 3342005
Query 111441 CGTTG--GCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCA 111497
||| ||| || || || ||||||||| ||| || || || ||||| |||||
Sbjct 3342006 TCTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGT 3342065
Query 111498 CCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCT 111557
|| | || || || || || || || | || | ||| | || | ||
Sbjct 3342066 AGCATTCAGCAAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCT 3342125
Query 111558 CAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAG 111617
|||||||||||||||| ||||| |||||||| |||| ||||| || | |||
Sbjct 3342126 CAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGGA 3342185
Query 111618 CCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATG 111677
|||| || | ||| ||||| ||| || || |||||||| | || ||| ||||||||||
Sbjct 3342186 CCTCCTCCTTACCGTGGTTCTTTCGCAAATCGAGGAACTCAAAGACATCAGCGTGCCATG 3342245
Query 111678 GCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGC 111731
|||| || |||| |||| || || ||||| ||| | || | || || |
Sbjct 3342246 GCTCCAGGTAGATAGCGAAAGCACC---AGGACGCTTGTTACCACCCTGGTCAACGTAAC 3342302
Query 111732 GCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCC 111791
| || ||| ||| || || |||||||| ||||| ||||||| ||| || || || |
Sbjct 3342303 GGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCATTTGACGTGCCGTTGGTAC 3342362
Query 111792 CCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCC 111851
| ||| ||| | |||| | | | ||||| || || |||||||| || |||
Sbjct 3342363 CGGCTATATAAGAGCCAGTGGCGCGGATACGATGGACGTTCAGACCAATACCTCCGGCCA 3342422
Query 111852 ACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCT 111911
||| ||||| || || | | ||||| | |||||||| | || ||| ||||
Sbjct 3342423 TCTTGGAGATCATGGCGCATGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCATCCT 3342482
Query 111912 TGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGG 111971
| || ||| |||||||| |||| ||| || ||||||||||| ||||| || |
Sbjct 3342483 TCATGTCGACGAGGAAGCATGACGACAGCTGAGGCTGGGGTGTACCAGCGTTGAACAGCG 3342542
Query 111972 TTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAAT 112031
| || | |||||| |||| | || |||||| || ||| ||||| | || |
Sbjct 3342543 TAGGCGATGCGTGTGTGAAAAATTTGTGCGACATCAGGTTGTAAGTCTCAATCACTCTCT 3342602
Query 112032 CAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCA 112091
| || || || || ||| || | || || ||||||| ||||| |||||| ||| |
Sbjct 3342603 CGATATCATCTCCCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGA 3342662
Query 112092 TGAGGATGCCATCGAGC 112108
|| |||||||||||
Sbjct 3342663 CGACTTTGCCATCGAGC 3342679
>seq15
Length=682953
Score = 95.1 bits (104), Expect = 2e-14
Identities = 167/241 (69%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 181806 TCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTG 181865
|| ||||||||| ||||| | ||| || | ||| | ||||| || | || ||||||
Sbjct 481088 TCGTTACCACCCGCAAGACGAGAACCGAAGTTACCGCTGGGCTCCAGGACATTTATGTTG 481029
Query 181866 TTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCC-GCAAGGGACACTTCACC 181924
|| || ||| | ||| | |||||| || ||| || | | |||| | | ||||||||
Sbjct 481028 TTCGAGCCTACAAAGTTTTGGGCCAAGCCAATGATCGTTTGCTGCAAAG-AGACTTCACC 480970
Query 181925 GTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATC 181984
|||||||||||||| || |||| | || | ||||||| | |||||| | || |
Sbjct 480969 GTGGTGGTAAGCTGTCTGTTCCGAGATGTAACCGGCCAACTCAACGACCTTCTTGTCTTT 480910
Query 181985 TTTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044
| | ||| | |||||| || || || ||||||||||| || || ||||| ||
Sbjct 480909 GGTCAAGTTACGCTTGAAGCAGGCGTAAATGACTTTCCTCTGACCTGGTTTCAGACCGTC 480850
Query 182045 C 182045
|
Sbjct 480849 C 480849
>seq1
Length=5395810
Score = 87.8 bits (96), Expect = 2e-12
Identities = 291/453 (64%), Gaps = 10/453 (2%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| ||||| |||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct 863269 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 863328
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485
||||| || || || | | || | | | | || |||| |||||
Sbjct 863329 AAGTCGAAGGGGTTGGTGGACTTGTAGACCTTCTCGTTG-----CCAAGGGCGACGAGGA 863383
Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545
|||| || | ||| |||| ||||||| |||| | | |||||| |||| ||
Sbjct 863384 GACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGAC 863443
Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605
| || || || || || | |||| | |||||||| | || || || | | |||
Sbjct 863444 TGCAGGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGGCGACGGCATCAGTGATGATCT 863503
Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 122665
| || | | |||| | || | || ||| ||| ||| || |
Sbjct 863504 TCTCGACGCGCGCCTTGCTGGGGCGGTTCCTCAGGTGAGAGAACAGCAGGCAGGCGAAGT 863563
Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725
| ||| |||||||| || || || || || || || |||||| || || ||||| |
Sbjct 863564 CGGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATCA 863623
Query 122726 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785
|||| |||||||||| ||| | || | | ||| | ||| ||||||||||||||| |
Sbjct 863624 GACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCTCAA 863683
Query 122786 CACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
|| || || |||| || || | |||| |||
Sbjct 863684 CAGCAGCGAAGGCAACCAGACGCTGGGCGTAGG 863716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029228808800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |