Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq3 322 6e-83
seq1 120 4e-22
>seq3
Length=3828249
Score = 322 bits (356), Expect = 6e-83
Identities = 1172/1822 (64%), Gaps = 23/1822 (1%)
Strand=Plus/Plus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
||||||||||||| ||| |||| | |||||||||||||| || || ||||| |
Sbjct 3340899 TGAACTGAATGGGCGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATGCCAGTTTTGAGAC 3340958
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923
|| |||||||| | | ||||| | | |||| | || || || | ||||
Sbjct 3340959 CCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGTGGG-CTCACGCATG 3341017
Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983
|| ||| | | || || || ||||||||| || || || || | ||| | |
Sbjct 3341018 TGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCACGGTCAGCAGACATCTG---C 3341074
Query 117984 ACATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040
||| | || ||| | | |||||| || ||| |||| | ||| ||||| | |||
Sbjct 3341075 ACAATCGTCCTCTGGGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATATCGGCCGGG 3341134
Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 118100
|| ||| || ||||| || ||| | | | || | | ||||||| |||
Sbjct 3341135 ATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATAATACGGTTCTTCATAGCCTCA 3341194
Query 118101 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCA 118160
||||| |||||||||| | | || ||| | || ||||| || |||||
Sbjct 3341195 GACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACCTGGAACTCG 3341254
Query 118161 CCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 118220
|| || || |||| | | ||||| || | ||||||||||| |||||||| |||||
Sbjct 3341255 CCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCACTCGTTGTTG 3341314
Query 118221 CCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 118280
|||| || || | |||||| || || |||||||||||||| | | |||||| |||| |
Sbjct 3341315 CCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATCAACAAGCTGTTTCGGATA 3341374
Query 118281 CCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT-GTCTCCCC 118339
|| | ||| | || | |||| | ||| |||||||| || || | | || |
Sbjct 3341375 CCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAGA-GATCAGAAGGCTGGAC 3341433
Query 118340 CTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATA 118399
|||||| ||| | || || || || || | || |||||||| |||||| ||
Sbjct 3341434 GCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGAGATCCCTCGTATGTCTGGTA 3341493
Query 118400 TGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTC 118459
|||||| ||||||| || | ||| | ||| | || || || || || || ||
Sbjct 3341494 TGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCATGGTAGATGGTCTC 3341553
Query 118460 AAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAA 118518
|| || | |||| || | | |||| ||| ||||| | | ||| |
Sbjct 3341554 GAAGATCTGTTTGTTCAGCTGGCGAG-CCTCAGGGGACTCAAAAGGCATGCGGAGAGCCA 3341612
Query 118519 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 118578
|| |||| || ||||| |||||||| | ||||| || | |||| ||| || |
Sbjct 3341613 AGAAGGCATCAGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGCATGTTGCTGT 3341672
Query 118579 TCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 118638
| || || |||||| || || ||| || | | | || | || |
Sbjct 3341673 TGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGAACAA 3341732
Query 118639 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT 118698
| |||| |||| || || || | | | | | | | | | || | | ||||
Sbjct 3341733 CGACCTGGGTGACCTCGTGGAGATGCTGGAAGTTGTAGCAGTTGTTTTCGTAGTCAACAT 3341792
Query 118699 ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACT 118758
| || || || || || ||||| || || |||| |||||| | || |||||
Sbjct 3341793 ATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACT 3341852
Query 118759 CTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT 118818
| || || || ||||||| ||| || || ||||| |||| |||||| || || ||
Sbjct 3341853 CGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCT 3341912
Query 118819 TTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGA 118878
| ||| || ||||||||||| |||||| | || | || ||||| || |||| || ||
Sbjct 3341913 TGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGA 3341972
Query 118879 GAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCG 118937
| || || | ||| | | || | ||| || || | | | || || ||| ||||
Sbjct 3341973 GGATGGCGTACCACAGCTTCTG-AGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTCTCG 3342031
Query 118938 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 118997
||||| ||| || || || ||||| ||||| | || | || || || ||
Sbjct 3342032 TACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCATTCAGCAAGGCCGGGGCACTCG 3342091
Query 118998 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 119057
| ||||| | ||| | ||| | || || |||||||||||||||||||||||| ||
Sbjct 3342092 TTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGA 3342151
Query 119058 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 119117
|||||||| || |||||| || || || | || || | || || || |||
Sbjct 3342152 ATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGTTCTTTCGC 3342211
Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177
|| || | || || | || ||| |||||||| || |||||||| | |||| | ||
Sbjct 3342212 AAATCGAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACC- 3342270
Query 119178 TTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGC 119231
| |||| |||| |||||| || || | |||||| ||| || |||||||||
Sbjct 3342271 --AGGACGCTTGTTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGC 3342328
Query 119232 ATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTG 119291
|| ||||||||||||| || ||| || || || ||| ||| | |||| | |
Sbjct 3342329 ATGGGAATGATACCATTTGACGTGCCGTTGGTACCGGCTATATAAGAGCCAGTGGCGCGG 3342388
Query 119292 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 119351
| | |||| || || ||||||||| || ||| ||| ||||| ||||| | ||
Sbjct 3342389 ATACGATGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCATGTCTTG 3342448
Query 119352 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGAC 119411
||| | ||||||| || || || |||| |||| | ||| ||||||||| ||||
Sbjct 3342449 AGAGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCATGACGAC 3342508
Query 119412 ATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT 119471
| |||||| |||||||||||||||||| || || || | ||||| |||| |
Sbjct 3342509 AGCTGAGGCTGGGGTGTACCAGCGTTGAACAGCGTAGGCGATGCGTGTGTGAAAAATTTG 3342568
Query 119472 TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 119531
|| |||||| || ||| ||||| | || || || || || ||||| |
Sbjct 3342569 TGCGACATCAGGTTGTAAGTCTCAATCACTCTCTCGATATCATCTCCCCAGATACCAACA 3342628
Query 119532 GAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGG 119591
| || ||||| | ||||| || || ||| | | | ||||||||| | |||||
Sbjct 3342629 GCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGG 3342688
Query 119592 TAACTCTTCTCCAAGGTCTTGA 119613
|| | ||||||||||||||
Sbjct 3342689 TATGACCGCTCCAAGGTCTTGA 3342710
>seq1
Length=5395810
Score = 120 bits (132), Expect = 4e-22
Identities = 292/440 (66%), Gaps = 2/440 (0%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 863269 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 863328
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| | || || | | | || | |||| |||||||||
Sbjct 863329 AAGTCGAAGGGGTTGGTGGACTTGTAGACCTTCTCGTTG-CCAAGGGCGACGAGGAGACG 863387
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | ||| |||| ||||||| |||| | || |||||| |||| || | ||
Sbjct 863388 GTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGACTGCA 863447
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || | |||| ||||||||||| | || || || | ||| |
Sbjct 863448 GGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGGCGACGGCATCAGTGATGATCTTCTC 863507
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTG 130026
| | | || ||| || | || | || ||| || ||| || ||
Sbjct 863508 GACGCGCGCCTTGCTGGGGCGGTTCCTCAGGTGAGAGAACAGCAGGCAGGCGAAGTCGGT 863567
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| |||||||||||||| ||||| || || || |||||| ||| || ||||| |||||
Sbjct 863568 GTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGACC 863627
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|||||||||| |||||| || | || | || ||||||||| ||||| |||
Sbjct 863628 GCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCTCAACAGC 863687
Query 130147 CGCGAACGCAAAGAGACGCT 130166
||||| |||| |||||||
Sbjct 863688 AGCGAAGGCAACCAGACGCT 863707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618432471154680
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