Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 349 4e-91 seq1 109 6e-19 >seq3 Length=3828249 Score = 349 bits (386), Expect = 4e-91 Identities = 1156/1775 (65%), Gaps = 41/1775 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| || || | ||||| || || || || || || Sbjct 3342654 CCACAGCACATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGATGATATCGAGAGAGTG 3342595 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || |||||| || | |||| |||||| | || || || ||| Sbjct 3342594 ATTGAGACTTACAACCTGATGTCGCACAAATTTTTCACACACGCATCGCCTACGCTGTTC 3342535 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || ||||||||||| || || |||| |||||||| ||| || ||||| ||| Sbjct 3342534 AACGCTGGTACACCCCAGCCTCAGCTGTCGTCATGCTTCCTCGTCGACATGAAGGATGAC 3342475 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || | |||||||| | ||||| | | || || ||||| ||| ||| || Sbjct 3342474 AGCATTGAGGGTATCTACGATACTCTCAAGACATGCGCCATGATCTCCAAGATGGCCGGA 3342415 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521 |||||||| || || ||||| | | | |||| | ||| ||| || || || Sbjct 3342414 GGTATTGGTCTGAACGTCCATCGTATCCGCGCCACTGGCTCTTATATAGCCGGTACCAAC 3342355 Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581 || ||| ||||||| ||||| |||||||| || || ||| ||| || || || || Sbjct 3342354 GGCACGTCAAATGGTATCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTACGTT 3342295 Query 104582 AATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 | || | ||| ||||| || || |||| |||| || |||||||||||| Sbjct 3342294 GACCAGGGTGGTAACAAGCGTCCT---GGTGCTTTCGCTATCTACCTGGAGCCATGGCAC 3342238 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 || ||| || | |||||||| || ||||| ||||| ||| | ||||||| ||| | Sbjct 3342237 GCTGATGTCTTTGAGTTCCTCGATTTGCGAAAGAACCACGGTAAGGAGGAGGTCCGGGCC 3342178 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 ||||| |||||| || ||||||||||| || |||||||||||| | |||||| ||| Sbjct 3342177 CGCGACCTCTTCCTTGCCCTCTGGATTCCTGACCTCTTCATGAAGCGGGTTGAGAAGAAC 3342118 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAG 104815 ||| | ||| | ||| | || || || || || || || | || | ||||| Sbjct 3342117 GGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTTGCTGAATGCTACGGTGAC 3342058 Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGTGC 104873 ||||| || || || ||| ||||||||| |||||| | ||| | || ||| || Sbjct 3342057 GAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCC--GCGGCCGCAAGACCATGA 3342000 Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 ||| | || | ||||| | || || ||| || | || |||||||| || | || | | Sbjct 3341999 AGGCT-CAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGGCAACCCCTTC 3341941 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992 ||||| ||||| || ||||| |||| ||||| || || ||||| |||| ||| Sbjct 3341940 ATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCATCCGC 3341881 Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052 || ||||| || || || || ||| | || | | |||||| |||||| || Sbjct 3341880 AGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGGTGGCTGTCTGC 3341821 Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGATTA 105111 ||||| || || || ||||| || ||||| || | | | |||| | | | | Sbjct 3341820 AACCTGGCCTCCATTGCTCTGCCAGCATATGTTGACTACGAAAACAACTGC-TACAACTT 3341762 Query 105112 TGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAG 105171 | | |||||||| || || | || ||| | |||| | |||||| Sbjct 3341761 CCAGCATCTCCACGAGGTCACCCAGGTCGTTGTTCGCAACTTGAACAAGATCATTGATGT 3341702 Query 105172 AAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 105231 || |||||||| || || || || ||| ||||| | || |||||| | Sbjct 3341701 CAACCACTACCCCGTGAAGGAGGCATACAACAGCAACATGCGACACAGGCCCATTGGTGT 3341642 Query 105232 CGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACG 105290 ||||| |||||||| || |||| ||| || | || || | | ||||| ||| | Sbjct 3341641 TGGTGTCCAGGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCTTTTGAGTCCCCTG 3341583 Query 105291 AAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GGCG 105349 | || | | || | || || |||||||| || || || ||| |||| ||| Sbjct 3341582 AGGCTCGCCAGCTGAACAAACAGATCTTCGAGACCATCTACCATGCTGCT-TTGACTGCG 3341524 Query 105350 AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 105409 || || | || ||||||| || ||||| | || | ||||| ||||| | || Sbjct 3341523 TCTTGCGACATCGCCAAGGTTGACGGCCCATACCAGACATACGAGGGATCTCCCGTCTCG 3341464 Query 105410 CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAA 105469 || || |||||||| ||| ||||||| | || | || || |||||||| Sbjct 3341463 CAGGGACAGCTTCAATATGACATGTGGGGCGTCCAGCCTTCTGATCTCTGGGACTGGGAT 3341404 Query 105470 GCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATG 105529 ||| | |||| | ||||||||| | ||| | || ||||| | | ||||| || ||| Sbjct 3341403 GCTTTGAAGGCAAAGATCAAGGAGCACGGTATCCGAAACAGCTTGTTGATGGCACCCATG 3341344 Query 105530 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACG 105589 || || || ||||| | || || |||| || || || ||||| || || ||||| | Sbjct 3341343 CCTACCGCATCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCTCT 3341284 Query 105590 AACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCATCTC 105646 |||||||| | | || | || || || ||||| | | ||||| | || ||| Sbjct 3341283 AACATCTACCAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTACTC 3341224 Query 105647 GTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAA 105706 | ||||| | |||||||||||| ||||| ||| ||||||| | | || | Sbjct 3341223 AGG---GACCTGACAGAGATTGGTCTGTGGTCTGAGGCTATGAAGAACCGTATTATTGCC 3341167 Query 105707 GCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGC 105766 | | |||||| || || || || || || || || ||| |||||| Sbjct 3341166 GAAGATGGTTCTATCCAGAACATCCCCAGCATCCCGGCCGATATCAAGGCTTTGTACAAG 3341107 Query 105767 ACAGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGC 105823 || || |||||| | | ||| || | || | | ||| | || || |||||| | Sbjct 3341106 ACCGTCTGGGAAGTCTCCCAGAGGACGATTG---TGCAGATGTCTGCTGACCGTGGTGCC 3341050 Query 105824 TTCATTGATCAAAGTCAAAG--TATGAATCTCTTCATG-GAAAGTCCAACGATGTCCAAG 105880 ||||| || | |||| || | | || || |||| | || || || ||| |||| Sbjct 3341049 TTCATCGACC--AGTCGCAGTCTCTCAACATCCACATGCGTGAG-CCCACTATGGGCAAG 3340993 Query 105881 CTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTC 105940 || || |||||| | | | |||||| |||||||||||| || ||||| |||||| Sbjct 3340992 ATCACTAGCATGCACTTCACCGGCTGGAAGCTGGGTCTCAAAACTGGCATGTACTACCTC 3340933 Query 105941 CGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 105974 || || |||| ||| |||||| |||||||||| Sbjct 3340932 CGCACTCAGGCGGCGGCAGCGCCC-ATTCAGTTCA 3340899 >seq1 Length=5395810 Score = 109 bits (120), Expect = 6e-19 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 94886 ||||||||||||||||||| ||| | ||| | | || | ||||| |||||||| || Sbjct 863685 TGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGG 863626 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||| ||||| || || ||||||||||||||| ||||||||||||||||| || ||| Sbjct 863625 TCTGATGCCTGGCCTGACCTTCTCCAACGAGCTGATCTCTCGTGACGAGGGTCTGCAC 863568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258226361720