Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 354 9e-93 seq5 161 1e-34 seq2 158 1e-33 seq4 122 1e-22 seq1 96.9 4e-15 >seq3 Length=3828249 Score = 354 bits (392), Expect = 9e-93 Identities = 1165/1785 (65%), Gaps = 63/1785 (4%) Strand=Plus/Plus Query 80005 ACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGATAGTACATGCCCGTCTTG 80064 || || | |||||| ||| ||| ||| | || || || ||||||||||| || ||| Sbjct 3340895 ACAGTGAACTGAATGGGCGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATGCCAGTTTTG 3340954 Query 80065 AGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCC 80124 || ||| |||||||||| | |||||| | ||| ||| | | ||||| | | Sbjct 3340955 AGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGTGGGCTCACGC 3341014 Query 80125 ATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCATTTCA 80184 ||| |||||| |||||||| ||||| |||||| || ||||| || || | ||| | Sbjct 3341015 ATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCACGGTCAGCAGACATCTGC 3341074 Query 80185 ATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACA---CCTTACGAAGCTCCTCT 80241 | ||| | | | || | | |||||| || || |||| |||| | || | Sbjct 3341075 ACAATCGTCCTCTGGGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA---TCGGCC 3341131 Query 80242 GGAATG-TCCAGATTTT--GCACACTGCCACCGTCCTTTACAATTTGATTTTTCAAT--- 80295 || ||| | ||| || | | | ||| | || | ||| | || |||| Sbjct 3341132 GGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATAATACGGTTCTTCATAGCC 3341191 Query 80296 TCAGACGTCCAGACACCAAGCT-TGTGCAGATCTTTCACAAG---GTGCTTGTTAATCAT 80351 |||||| || | ||||| || ||| ||| || | | || | | ||| | | Sbjct 3341192 TCAGAC---CACAGACCAATCTCTGT-CAGGTCCCTGAGTAGCCAGGGGTTGACGACCTG 3341247 Query 80352 GACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGC 80411 || |||| || || || || ||| | || | ||| | ||||| ||||| || Sbjct 3341248 GA---ACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCA 3341304 Query 80412 CTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGA 80471 ||||||||| || || ||||| | ||| || || ||||| || | | ||||| Sbjct 3341305 CTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGTGCCATCAACAAGCT 3341364 Query 80472 ATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAA---TCTGA---CCAAAAATCAAC 80525 || || | ||||||| |||||| | | |||| || | ||| | |||| Sbjct 3341365 GTTTCGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAGAGATCAG- 3341423 Query 80526 CCCAACGCTGTGAC--CCCACATGTCGTGCTGCAAGATG-CCCTCCGACGCCGGAGACCC 80582 || |||| ||| |||||||||| | || ||| || |||| ||| | ||||| || Sbjct 3341424 ---AAGGCTG-GACGCCCCACATGTCATATTG-AAGCTGTCCCTGCGAGACGGGAGATCC 3341478 Query 80583 CGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGC 80642 | || | |||| ||| ||||| || |||||| | || || ||| | | | || || Sbjct 3341479 CTCGTATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGC 3341538 Query 80643 GTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGA 80702 || || ||| ||| |||| ||||||| ||| |||| ||| || || | Sbjct 3341539 ATGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAAAGG 3341598 Query 80703 CAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTG 80762 || || | || ||| | ||||| || ||||| || || | | || || | ||| Sbjct 3341599 CATGCGGAGAGCCAAGAAGGCATCAGCAAGACCCTGGACACCAACACCAATGGGCCTGTG 3341658 Query 80763 GCGCTTGTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGT 80821 ||| |||| | | | | |||||| | ||||| ||| ||| |||| || Sbjct 3341659 TCGCATGTTGCTGTTG-TATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGT 3341717 Query 80822 TCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGT 80878 ||| |||||| ||| ||| | || || || || || | ||| |||| | | | || Sbjct 3341718 TCAAGTTGCGAACAACGACCTGGGTGACCTCGTGGAGATGCTGGAAGTTGTAGCAGTTGT 3341777 Query 80879 TCCCCT--TCA-CAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTT 80935 | | | ||| || |||| || || | ||| ||||| ||||| || |||||||| | Sbjct 3341778 TTTCGTAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCAT 3341837 Query 80936 CAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGT 80995 ||| | | |||||| ||| || ||||||| || || || || ||||||| Sbjct 3341838 CAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGT 3341897 Query 80996 TTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCT 81055 | |||||||| |||| |||||| || ||||||||| |||| | ||| | ||||||| Sbjct 3341898 TCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCT 3341957 Query 81056 CGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATT 81115 || ||| | || ||||||||||| ||| | || | ||||| | ||||||| Sbjct 3341958 CGGTCTGGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGC 3342017 Query 81116 TGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGA 81175 |||||| | | ||||| |||| | ||||||| | |||||| ||||| | Sbjct 3342018 GGCCTTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCATTCAGCAA 3342077 Query 81176 GGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCA 81235 || | ||||||||||| |||||||| ||| ||||||| || ||||| || ||||| Sbjct 3342078 GGCCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCA 3342137 Query 81236 TGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCAC 81295 |||| |||||| ||||||||||| ||| ||||||||| || ||||||| | || Sbjct 3342138 TGAAGAGGTCAGGAATCCAGAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTAC 3342197 Query 81296 CCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACA 81355 | ||||| ||||| ||||| || || | || || || |||||||||||||| || | Sbjct 3342198 CGTGGTTCTTTCGCAAATCGAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGA 3342257 Query 81356 CGGCGATCG-AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGT 81409 |||| | || | |||| | |||||||||| |||||||||||||| || Sbjct 3342258 TAGCGAAAGCACCAGGACGCTTGTTA---CCACCCTGGTCAACGTAACGGGCAGTGTTGT 3342314 Query 81410 TAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCG 81469 | || ||||| | ||| || |||||||||| |||| ||||| ||||| | ||| | Sbjct 3342315 TGAAGACACGAAGCATGGGAATGATACCATTTGACGTGCCGTTGGTACCGGCTATATAAG 3342374 Query 81470 ACCCCTTGGCGCGCACCTTGCTGATTGA----AAGACCGATGCCACCTGACCACTTTGAA 81525 | || ||||||| | | | ||| || ||||| || || || | | ||| || Sbjct 3342375 AGCCAGTGGCGCGGA---TAC-GATGGACGTTCAGACCAATACCTCCGGCCATCTTGGAG 3342430 Query 81526 ATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCA 81585 ||| || || || | || || || || ||||| ||||| || | |||||||| Sbjct 3342431 ATCATGGCGCATGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCG 3342490 Query 81586 AGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTC 81645 | | ||| || |||| |||||| || || || |||||||| || || | Sbjct 3342491 ACGAGGAAGCATGACGACAGCTGAGGCTGGGGTGTACCAGCGTTGAACAGCGTAGGCGAT 3342550 Query 81646 GCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCG 81705 ||||| ||||| | || |||||||||| || || || | || | ||||| Sbjct 3342551 GCGTGTGTGAAAAATTTGTGCGACATCAGGTTGTAAGTCTCAATCACTCTCTCGATATCA 3342610 Query 81706 TCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGGC 81750 || || ||||| | ||| |||||||| | ||||| ||| ||| Sbjct 3342611 TCTCCCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGC 3342655 >seq5 Length=3440085 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || || || ||||| ||||| | Sbjct 3137599 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCT 3137658 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || |||||||||||||||||||| ||||| |||||| Sbjct 3137659 GACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCTGACCAG 3137718 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || ||||| ||||| || ||||| | || ||||| | ||||| || Sbjct 3137719 CAGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 3137778 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| ||||| || ||| | ||||| || || || Sbjct 3137779 ATCCAGAAGGAGTCCACCCTTCACCTCGTCCTCCGTCTCCGTGGCGG 3137825 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||||||||| || ||||||||||| ||||| Sbjct 3137827 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 3137886 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || |||||||||||||| || || ||||||||| Sbjct 3137887 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 3137946 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| |||||||| | || ||||| | ||||| || Sbjct 3137947 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 3138006 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || ||||| || | || | || || || ||||| Sbjct 3138007 ATCCAGAAGGAGTCTACTCTCCACTTGGTTCTCCGCCTCCGTGGTGG 3138053 Score = 140 bits (154), Expect = 4e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || ||||| || || || ||||| ||||| Sbjct 3138055 ATGCAGATCTTCGTCAAGACATTGACGGGAAAGACGATAACACTGGAGGTGGAGTCCTCG 3138114 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||| || ||||||||||||||||| || || ||||||||| Sbjct 3138115 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 3138174 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| | || |||| || || || | ||||| || Sbjct 3138175 CAGCGTCTCATCTTCGCTGGAAAGCAGTTGGAAGATGGCCGGACGCTGTCTGACTACAAC 3138234 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || || || || | || | ||||| || |||||||| Sbjct 3138235 ATCCAGAAGGAGTCTACCCTGCACTTGGTGCTCCGTCTGCGTGGTGGACA 3138284 >seq2 Length=4895233 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || || ||||| || || |||||||| ||||| Sbjct 4675366 ATCATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACCCTTGAGGTGGAGTCC 4675425 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||| | ||| | ||| | || ||||||||||||||||| || || || ||| Sbjct 4675426 TCGGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGAC 4675485 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || || || || || ||||| |||||||| | || ||||| | ||||| Sbjct 4675486 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 4675545 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| ||||| || || ||||| || || ||||| Sbjct 4675546 AACATCCAGAAGGAGAGCACCCTTCACCTCGTGTTGCGCCTCCGTGGTGG 4675595 >seq4 Length=3484069 Score = 122 bits (134), Expect = 1e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || |||||||| ||||| || | ||| Sbjct 949726 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 949785 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || |||||||||||||| || || || ||||||||||| | Sbjct 949786 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGATT 949845 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| | ||||| || |||| || Sbjct 949846 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 949905 Query 27594 GG 27595 || Sbjct 949906 GG 949907 >seq1 Length=5395810 Score = 96.9 bits (106), Expect = 4e-15 Identities = 298/452 (66%), Gaps = 22/452 (5%) Strand=Plus/Minus Query 64714 CAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCT 64773 |||||||| | || || || ||| || || || ||||| || | ||| || Sbjct 863708 CAGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCC 863649 Query 64774 ATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATC 64833 || |||||||| || ||||| || |||||||| || ||| | || || |||||||||||| Sbjct 863648 ATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCTGGCCTGACCTTCTCCAACGAGCTGATC 863589 Query 64834 TCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAGG 64891 ||||| |||||||| || ||| || || || | || |||||| ||||| | | Sbjct 863588 TCTCGTGACGAGGGTCTGCACACCGACTT--CGCCTGCCTGCTGTTCTCTCACCTGAGGA 863531 Query 64892 A-CAAACCATCA---CATGGGACTATAATTGAT-AT-AGTAAAATCGGCTGTAGAAATTG 64945 | | ||| || | | | | | || ||| || | | | || || | |||| Sbjct 863530 ACCGCCCCAGCAAGGCGCGCGTCGAGAA--GATCATCACTGA----TGCCGTCGCCATTG 863477 Query 64946 AAAAGGAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGA 65005 | ||||| ||| | |||| || ||||| || |||| |||||||| | ||| | || Sbjct 863476 AGAAGGAGTTCCTGACTGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCAACCTGA 863417 Query 65006 TGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTA---TTAAGC 65062 |||| ||||| ||||| || || || || || || || |||| | ||| Sbjct 863416 TGAAGCAGTACATCGAGTTCGTGGCCGACCGTCTCCTCGTCGCCCTTGGCAACGAGAAGG 863357 Query 65063 CCTACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGA 65122 |||| || || | || || || |||| ||||||| ||| ||| | || |||| Sbjct 863356 TCTAC---AAGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGA 863300 Query 65123 CTAACTTTTTTGAAAAGAGGGTAGGTGATTAC 65154 | ||||| || || ||| | || ||||| ||| Sbjct 863299 CCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 863268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307883505360